RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TCF4P15884 667 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 ZNF28P17035 718 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 IL1R2P27930 398 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 STC1P52823 247 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 EPHA4P54764 986 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 GFERP55789 205 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 UBXN1Q04323 297 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 MAP7Q14244 749 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 IHHQ14623 411 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 SMTNL2Q2TAL5 461 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 RALGPS1Q5JS13 557 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 MARC1Q5VT66 337 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 TMCO3Q6UWJ1 677 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 BBS5Q8N3I7 341 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 ESX1Q8N693 406 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 EXD1Q8NHP7 514 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 ERGIC2Q96RQ1 377 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 ULBP3Q9BZM4 244 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 STN1Q9H668 368 aaKnown RBP14.56□□□□□ -0.08
TRAF4-212ENST00000498540 LRRC4CQ9HCJ2 640 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 NT5MQ9NPB1 228 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 MN1Q10571 1320 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-212ENST00000498540 NOTCH2Q04721 2471 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 A0A0J9YYE9 177 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 SNX2O60749 519 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 TRBC1P01850 177 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 PYGLP06737 847 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 ACP5P13686 325 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 FERP16591 822 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 ZNF30P17039 623 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 DLSTP36957 453 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 UQCRFS1P47985 274 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 DPYSL2Q16555 572 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 TCTN3Q6NUS6 607 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 IRF2BP2Q7Z5L9 587 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 POLNQ7Z5Q5 900 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 TMEM135Q86UB9 458 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 SLC9B2Q86UD5 537 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 NLRP8Q86W28 1048 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 ATCAYQ86WG3 371 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 SH3KBP1Q96B97 665 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 CSPG4P5Q96PW8 444 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 HERPUD2Q9BSE4 406 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 VPS18Q9P253 973 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 CNOT8Q9UFF9 292 aaKnown RBP14.55□□□□□ -0.08
TRAF4-212ENST00000498540 LIMA1Q9UHB6 759 aaKnown RBP14.55□□□□□ -0.08
TRAF4-212ENST00000498540 CROTQ9UKG9 612 aa14.55□□□□□ -0.08
TRAF4-212ENST00000498540 CNOT6Q9ULM6 557 aaKnown RBP14.55□□□□□ -0.08
TRAF4-212ENST00000498540 TNRC6AQ8NDV7 1962 aaKnown RBP14.54□□□□□ -0.08
TRAF4-212ENST00000498540 MYO9AB2RTY4 2548 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 MKRN2OSH3BPM6 223 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 ANKRD34CP0C6C1 535 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 ATP1A3P13637 1013 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 F3P13726 295 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 ARL4AP40617 200 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 CDH6P55285 790 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 FOXM1Q08050 763 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 ERV3-1Q14264 604 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 ASB18Q6ZVZ8 466 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 LYSMD3Q7Z3D4 306 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.54□□□□□ -0.08
TRAF4-212ENST00000498540 TEX19Q8NA77 164 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 GALNT6Q8NCL4 622 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 NSMCE1Q8WV22 266 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 HSPH1Q92598 858 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 WDR24Q96S15 920 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
TRAF4-212ENST00000498540 OGFRQ9NZT2 677 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 CPNE7Q9UBL6 633 aa14.54□□□□□ -0.08
TRAF4-212ENST00000498540 KIR2DS5A0A0G2JLQ3 304 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 A0A0G2JNG1 304 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 LILRA5A6NI73 299 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 FADS2P1A8MWK0 482 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 KIR2DS3K7RE56 304 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 CLDN7O95471 211 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 C9P02748 559 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 PDGFAP04085 211 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 CCDC172P0C7W6 258 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 NOP2P46087 812 aaKnown RBP14.53□□□□□ -0.08
TRAF4-212ENST00000498540 EPHB1P54762 984 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 SH3BP2P78314 561 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 DSC2Q02487 901 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 ITKQ08881 620 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 KIR2DS5Q14953 304 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 TXNRD3NBQ6F5E7 133 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 PPP1R2P3Q6NXS1 205 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 C6orf15Q6UXA7 325 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-212ENST00000498540 APTXQ7Z2E3 356 aaKnown RBP14.53□□□□□ -0.08
TRAF4-212ENST00000498540 PLXDC1Q8IUK5 500 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 NDUFAF2Q8N183 169 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 TEX26Q8N6G2 289 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 C9orf72Q96LT7 481 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-212ENST00000498540 EPB41L1Q9H4G0 881 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 PRDM8Q9NQV8 689 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 TLK1Q9UKI8 766 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 POLHQ9Y253 713 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 CHKBQ9Y259 395 aa14.53□□□□□ -0.08
TRAF4-212ENST00000498540 PCDHB3Q9Y5E6 796 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms