RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 SOD1P00441 154 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 FURINP09958 794 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 RPL7AP62424 266 aaKnown RBP16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 SEMA5AQ13591 1074 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 DPCR1Q3MIW9 517 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 PPP1R15BQ5SWA1 713 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 ARHGAP36Q6ZRI8 547 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 MAMDC2Q7Z304 686 aaPredicted RBP16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 TSPAN33Q86UF1 283 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 TRIM74Q86UV6 250 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 FNIP1Q8TF40 1166 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 THAP4Q8WY91 577 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 C9orf72Q96LT7 481 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 SLC29A3Q9BZD2 475 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 RMI1Q9H9A7 625 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 CASS4Q9NQ75 786 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 CPNE7Q9UBL6 633 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 CD84Q9UIB8 345 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 LNPEPQ9UIQ6 1025 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 PPIL1Q9Y3C6 166 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 ABCA12Q86UK0 2595 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 LRBAP50851 2863 aa16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 MN1Q10571 1320 aaPredicted RBP16.41■□□□□ 0.22
SUPT20H-223ENST00000497318 ANKRD17O75179 2603 aaKnown RBP16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 LILRA5A6NI73 299 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 LRCH4O75427 683 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 TPM2P07951 284 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 F3P13726 295 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 ZNF28P17035 718 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 ZNF30P17039 623 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 EEF1GP26641 437 aaKnown RBP16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 HCAR3P49019 387 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 TRAF2Q12933 501 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 DNASE1L3Q13609 305 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 PPP6R3Q5H9R7 873 aaPredicted RBP16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 MON1BQ7L1V2 547 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 PSTKQ8IV42 348 aaKnown RBP16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 SCAMP4Q969E2 229 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 COX14Q96I36 57 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 OR6C1Q96RD1 312 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 SLC25A23Q9BV35 468 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 GANQ9H2C0 597 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 UCK1Q9HA47 277 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 FAM207AQ9NSI2 230 aaPredicted RBP16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 DNPEPQ9ULA0 475 aa16.4■□□□□ 0.22
SUPT20H-223ENST00000497318 DOPEY1Q5JWR5 2465 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 ESPL1Q14674 2120 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 TCRBV5S1A1TA0A578 114 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 A6NCN8 305 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 RASSF9O75901 435 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 AMD1P17707 334 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 CTPS1P17812 591 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 PSMA2P25787 234 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 JAM2P57087 298 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 TCP11X2Q5H9J9 407 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 LRRC66Q68CR7 880 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 TMEM135Q86UB9 458 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 PPP1R3BQ86XI6 285 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 PHYKPLQ8IUZ5 450 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 RAVER1Q8IY67 606 aaKnown RBP16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 NPWQ8N729 165 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 TGM7Q96PF1 710 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 MGME1Q9BQP7 344 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 RIOK2Q9BVS4 552 aaKnown RBP16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 TBC1D10AQ9BXI6 508 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 GPR87Q9BY21 358 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 CLSTN2Q9H4D0 955 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 PCSK1NQ9UHG2 260 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 G3BP2Q9UN86 482 aaKnown RBP16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 KCNK6Q9Y257 313 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 PRKAB1Q9Y478 270 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 PCDHGA9Q9Y5G4 932 aaKnown RBP16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 CELSR2Q9HCU4 2923 aa16.39■□□□□ 0.21
SUPT20H-223ENST00000497318 PRPSAP2O60256 369 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 SPAG6O75602 509 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 RNF8O76064 485 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 C9P02748 559 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 PDGFAP04085 211 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 ACP5P13686 325 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 SEPHS1P49903 392 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 EPHB1P54762 984 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 PTSQ03393 145 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 CA9Q16790 459 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 FKBP15Q5T1M5 1219 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 MARC1Q5VT66 337 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 RFLNAQ6ZTI6 216 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 PIH1D2Q8WWB5 315 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 ELMO2Q96JJ3 720 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 KCTD15Q96SI1 283 aaPredicted RBP16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 ZNF768Q9H5H4 540 aaKnown RBP16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 ZWILCHQ9H900 591 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 ACSS2Q9NR19 701 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 SAMSN1Q9NSI8 373 aaKnown RBP16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 CACNA1DQ01668 2161 aa16.38■□□□□ 0.21
SUPT20H-223ENST00000497318 GOLGA6L3A6NEY3 463 aa16.37■□□□□ 0.21
SUPT20H-223ENST00000497318 DNAJC6O75061 913 aa16.37■□□□□ 0.21
SUPT20H-223ENST00000497318 DNAJB5O75953 348 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms