RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	PYGM	P11217	842 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	HLA-DPA1	P20036	260 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	AK4	P27144	223 aa	Predicted RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	TNNT3	P45378	269 aa	Predicted RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	ATP5O	P48047	213 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	CTBS	Q01459	385 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	NR1D2	Q14995	579 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	PYCR3	Q53H96	274 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	ITPRIPL1	Q6GPH6	555 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	ZNF438	Q7Z4V0	828 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	GALNT13	Q8IUC8	556 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	RNF10	Q8N5U6	811 aa	Known RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	GPR26	Q8NDV2	337 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	SNIP1	Q8TAD8	396 aa	Known RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	ZDHHC1	Q8WTX9	485 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	PLEKHG4B	Q96PX9	1271 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	GPR63	Q9BZJ6	419 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	RMI1	Q9H9A7	625 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	HACD3	Q9P035	362 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	RSPH14	Q9UHP6	348 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	SHOC2	Q9UQ13	582 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	TMEM98	Q9Y2Y6	226 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	GPSM3	Q9Y4H4	160 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	SPO11	Q9Y5K1	396 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	ENTPD2	Q9Y5L3	495 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	OAS3	Q9Y6K5	1087 aa	Known RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	CAPN6	Q9Y6Q1	641 aa		13.23	□□□□□ -0.29
RBM28-208	ENST00000495327	URB1	O60287	2271 aa	Known RBP	13.23	□□□□□ -0.29
RBM28-208	ENST00000495327		A0A087WV48	116 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327		A0A1W2PQM1	296 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	GPR89A	B7ZAQ6	455 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	DDX3Y	O15523	660 aa	Known RBP	13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	ASMTL	O95671	621 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	SLC4A1	P02730	911 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	FGF1	P05230	155 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	GPR89B	P0CG08	455 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	HMGCL	P35914	325 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	ACTR1B	P42025	376 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	EIF3E	P60228	445 aa	Known RBP	13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	ACTR1A	P61163	376 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	GABRE	P78334	506 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	KLF1	Q13351	362 aa	Predicted RBP	13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	SLC1A5	Q15758	541 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	TBC1D25	Q3MII6	688 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	SIRPB2	Q5JXA9	342 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	AADACL2	Q6P093	401 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	SLC30A9	Q6PML9	568 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	SPRED1	Q7Z699	444 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	PHYKPL	Q8IUZ5	450 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	CCNJL	Q8IV13	435 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	SFTPA2	Q8IWL1	248 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	LSMEM2	Q8N112	164 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	CCDC112	Q8NEF3	446 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	UBE2Q2	Q8WVN8	375 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	LIN37	Q96GY3	246 aa	Predicted RBP	13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	HES6	Q96HZ4	224 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	GFM1	Q96RP9	751 aa	Known RBP	13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	GORASP1	Q9BQQ3	440 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	SPATA16	Q9BXB7	569 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	TSGA10	Q9BZW7	698 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	CARD9	Q9H257	536 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	POLR1B	Q9H9Y6	1135 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	ADGRG1	Q9Y653	693 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	RNF215	Q9Y6U7	377 aa		13.22	□□□□□ -0.29
RBM28-208	ENST00000495327	GOLGA6L9	A6NEM1	432 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	AURKA	O14965	403 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	CASC3	O15234	703 aa	Known RBP	13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ARHGAP6	O43182	974 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	TLX3	O43711	291 aa	Predicted RBP	13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	KRT86	O43790	486 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ANXA9	O76027	345 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	STK10	O94804	968 aa	Known RBP	13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	FTCD	O95954	541 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ATP1A1	P05023	1023 aa	Known RBP	13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	RPLP0	P05388	317 aa	Known RBP	13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	BPI	P17213	487 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ACTN2	P35609	894 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	CHRNA4	P43681	627 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	LSS	P48449	732 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	GEM	P55040	296 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	MAZ	P56270	477 aa	Known RBP	13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	CCL7	P80098	99 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ANKRD20A2	Q5SQ80	823 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ANKRD20A1	Q5TYW2	823 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ANKRD20A3	Q5VUR7	823 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ALS2CL	Q60I27	953 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	MARK2	Q7KZI7	788 aa	Known RBP	13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	NAGS	Q8N159	534 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	TTC30B	Q8N4P2	665 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	TTC13	Q8NBP0	860 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	IPMK	Q8NFU5	416 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	DTX3L	Q8TDB6	740 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	GLYATL1	Q969I3	302 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	ATXN7L3B	Q96GX2	97 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	SPATA13	Q96N96	652 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	PPP1R2P1	Q96PQ5	205 aa		13.21	□□□□□ -0.29
RBM28-208	ENST00000495327	VPS35	Q96QK1	796 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms