RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 C10orf88Q9H8K7 445 aa17.51■□□□□ 0.39
HDAC4-211ENST00000494800 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDAC4-211ENST00000494800 TAAR2Q9P1P5 351 aa17.51■□□□□ 0.39
HDAC4-211ENST00000494800 ZNHIT2Q9UHR6 403 aa17.51■□□□□ 0.39
HDAC4-211ENST00000494800 PKP3Q9Y446 797 aa17.51■□□□□ 0.39
HDAC4-211ENST00000494800 FRYQ5TBA9 3013 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 FADS2P1A8MWK0 482 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 GPR89AB7ZAQ6 455 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 PPFIA2O75334 1257 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 SLC25A14O95258 325 aaPredicted RBP17.5■□□□□ 0.39
HDAC4-211ENST00000494800 FUCA1P04066 466 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 ATP1A1P05023 1023 aaKnown RBP17.5■□□□□ 0.39
HDAC4-211ENST00000494800 GPR89BP0CG08 455 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 PNLIPP16233 465 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 ACTR1BP42025 376 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 ACTR1AP61163 376 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 PYCR3Q53H96 274 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 CERCAMQ5T4B2 595 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 ARHGEF18Q6ZSZ5 1173 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 GPR26Q8NDV2 337 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 BLOC1S5Q8TDH9 187 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 EID2BQ96D98 161 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 LZTFL1Q9NQ48 299 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 LRIT1Q9P2V4 623 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 SPO11Q9Y5K1 396 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 LRP4O75096 1905 aa17.5■□□□□ 0.39
HDAC4-211ENST00000494800 NUDT21O43809 227 aaKnown RBP17.49■□□□□ 0.39
HDAC4-211ENST00000494800 NOBOXO60393 691 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 BPIP17213 487 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 AK4P27144 223 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-211ENST00000494800 PSMB4P28070 264 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 HLTFQ14527 1009 aaKnown RBP eCLIP17.49■□□□□ 0.39
HDAC4-211ENST00000494800 RTP5Q14D33 572 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 RPS6KA1Q15418 735 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 ISXQ2M1V0 245 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 ZNF662Q6ZS27 426 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 NRROSQ86YC3 692 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 CCDC110Q8TBZ0 833 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 GLYATL1Q969I3 302 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 GFM1Q96RP9 751 aaKnown RBP17.49■□□□□ 0.39
HDAC4-211ENST00000494800 FICDQ9BVA6 458 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 FRMD8P1Q9BZ68 369 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-211ENST00000494800 CARD9Q9H257 536 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 TRIM39Q9HCM9 518 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 SPATS2LQ9NUQ6 558 aaKnown RBP17.49■□□□□ 0.39
HDAC4-211ENST00000494800 APPL1Q9UKG1 709 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 CNOT6Q9ULM6 557 aaKnown RBP17.49■□□□□ 0.39
HDAC4-211ENST00000494800 AKAP13Q12802 2813 aa17.49■□□□□ 0.39
HDAC4-211ENST00000494800 C5orf60A6NFR6 353 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 C2orf81A6NN90 581 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 SRRM3A6NNA2 597 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-211ENST00000494800 RHPN2P1A8MT19 583 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 TMX2-CTNND1H3BSU7 103 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 USP12O75317 370 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 CAPNS1P04632 268 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 RPLP0P05388 317 aaKnown RBP17.48■□□□□ 0.39
HDAC4-211ENST00000494800 SPAM1P38567 509 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 CHRNA4P43681 627 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 KLF1Q13351 362 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-211ENST00000494800 P3H1Q32P28 736 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 CHST15Q7LFX5 561 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-211ENST00000494800 CCNJLQ8IV13 435 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 LSMEM2Q8N112 164 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 PTCD2Q8WV60 388 aaKnown RBP17.48■□□□□ 0.39
HDAC4-211ENST00000494800 BPIFA1Q9NP55 256 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 OAS3Q9Y6K5 1087 aaKnown RBP17.48■□□□□ 0.39
HDAC4-211ENST00000494800 ASPMQ8IZT6 3477 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 PLXNB3Q9ULL4 1909 aa17.48■□□□□ 0.39
HDAC4-211ENST00000494800 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 AURKAO14965 403 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 GRID2O43424 1007 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 NUAK1O60285 661 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 DNAJC6O75061 913 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 AGTP01019 485 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 SLC2A4P14672 509 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 PDE1BQ01064 536 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 GTF2H3Q13889 308 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 PARP6Q2NL67 630 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 Q8N9G6 341 aaPredicted RBP17.47■□□□□ 0.39
HDAC4-211ENST00000494800 FAM71DQ8N9W8 422 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 TRIM58Q8NG06 486 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 GDAP1Q8TB36 358 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 DTX3LQ8TDB6 740 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 TTC25Q96NG3 672 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 VPS35Q96QK1 796 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 ZCCHC2Q9C0B9 1178 aaKnown RBP17.47■□□□□ 0.39
HDAC4-211ENST00000494800 OR2AG1Q9H205 316 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 LRRN3Q9H3W5 708 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 STN1Q9H668 368 aaKnown RBP17.47■□□□□ 0.39
HDAC4-211ENST00000494800 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 FEZ2Q9UHY8 353 aaPredicted RBP17.47■□□□□ 0.39
HDAC4-211ENST00000494800 PCDHB1Q9Y5F3 818 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 RNF215Q9Y6U7 377 aa17.47■□□□□ 0.39
HDAC4-211ENST00000494800 NTN3O00634 580 aaPredicted RBP17.46■□□□□ 0.39
HDAC4-211ENST00000494800 STX7O15400 261 aaKnown RBP17.46■□□□□ 0.39
HDAC4-211ENST00000494800 VEGFDO43915 354 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 ECEL1O95672 775 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 CRTAMO95727 393 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 ACTN2P35609 894 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 CCL7P80098 99 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms