RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 KCTD5Q9NXV2 234 aa13.72□□□□□ -0.21
ATG4B-222ENST00000491867 TBC1D29Q9UFV1 150 aa13.72□□□□□ -0.21
ATG4B-222ENST00000491867 PCDHGB7Q9Y5F8 929 aa13.72□□□□□ -0.21
ATG4B-222ENST00000491867 GTF3C3Q9Y5Q9 886 aa13.72□□□□□ -0.21
ATG4B-222ENST00000491867 GOLGA6L3A6NEY3 463 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 WASH4PA8MWX3 477 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
ATG4B-222ENST00000491867 MT-ND3P03897 115 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 MMEP08473 750 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 UCHL3P15374 230 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 TEAD1P28347 426 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 VIPR1P32241 457 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 LRP8Q14114 963 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 NAA35Q5VZE5 725 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 SP5Q6BEB4 398 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-222ENST00000491867 IYDQ6PHW0 289 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 ZGRF1Q86YA3 2104 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 RHOT1Q8IXI2 618 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 CBARPQ8N350 705 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-222ENST00000491867 CISD2Q8N5K1 135 aaKnown RBP13.71□□□□□ -0.21
ATG4B-222ENST00000491867 CPA5Q8WXQ8 436 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 NSMCE3Q96MG7 304 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 TGM7Q96PF1 710 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 GPR87Q9BY21 358 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 BRD8Q9H0E9 1235 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 CNOT8Q9UFF9 292 aaKnown RBP13.71□□□□□ -0.21
ATG4B-222ENST00000491867 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
ATG4B-222ENST00000491867 PES1O00541 588 aaKnown RBP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 CREB3O43889 395 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 PALMO75781 387 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 CEACAM4O75871 244 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 C9P02748 559 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 FGF5P12034 268 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 TYRP1P17643 537 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 PTPN4P29074 926 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 PTGIRP43119 386 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 GPR1P46091 355 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 ITGA1P56199 1179 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 HDAC4P56524 1084 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 ELOAQ14241 798 aaKnown RBP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 PLEKHN1Q494U1 663 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 FAM199XQ6PEV8 388 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 SLC9B2Q86UD5 537 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 IQCKQ8N0W5 287 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 FDCSPQ8NFU4 85 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 NUDT9Q9BW91 350 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 STK33Q9BYT3 514 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 CLSTN2Q9H4D0 955 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 AKIRIN1Q9H9L7 192 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 OGFRQ9NZT2 677 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 CPNE7Q9UBL6 633 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 ZNHIT2Q9UHR6 403 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 NOCTQ9UK39 431 aaKnown RBP13.7□□□□□ -0.22
ATG4B-222ENST00000491867 PRKAB1Q9Y478 270 aa13.7□□□□□ -0.22
ATG4B-222ENST00000491867 A6NL46 340 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 SNX2O60749 519 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 RASSF9O75901 435 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 TIAF1O95411 115 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 SOD1P00441 154 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 TNFAIP3P21580 790 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 LHCGRP22888 699 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 SCNN1BP51168 640 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 RPS15P62841 145 aaKnown RBP13.69□□□□□ -0.22
ATG4B-222ENST00000491867 CDK18Q07002 472 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-222ENST00000491867 ADAMTSL4Q6UY14 1074 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 RFLNAQ6ZTI6 216 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 STRADAQ7RTN6 431 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 SLFN11Q7Z7L1 901 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 SYVN1Q86TM6 617 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 PPP1R3BQ86XI6 285 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 ZNF677Q86XU0 584 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 HPS6Q86YV9 775 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 JOSD2Q8TAC2 188 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 FAM172AQ8WUF8 416 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 SLC20A1Q8WUM9 679 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 CENPIQ92674 756 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-222ENST00000491867 NTAN1Q96AB6 310 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 CELF6Q96J87 481 aaKnown RBP13.69□□□□□ -0.22
ATG4B-222ENST00000491867 CINPQ9BW66 212 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-222ENST00000491867 LRRC19Q9H756 370 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 CATSPERBQ9H7T0 1116 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 G3BP2Q9UN86 482 aaKnown RBP13.69□□□□□ -0.22
ATG4B-222ENST00000491867 KCNK6Q9Y257 313 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 PCYT1BQ9Y5K3 369 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-222ENST00000491867 MYO7BQ6PIF6 2116 aa13.69□□□□□ -0.22
ATG4B-222ENST00000491867 TTC24A2A3L6 582 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-222ENST00000491867 LILRA5A6NI73 299 aa13.68□□□□□ -0.22
ATG4B-222ENST00000491867 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
ATG4B-222ENST00000491867 ZNF185O15231 689 aa13.68□□□□□ -0.22
ATG4B-222ENST00000491867 KIF1CO43896 1103 aaKnown RBP13.68□□□□□ -0.22
ATG4B-222ENST00000491867 MMP8P22894 467 aa13.68□□□□□ -0.22
ATG4B-222ENST00000491867 PTPN9P43378 593 aa13.68□□□□□ -0.22
ATG4B-222ENST00000491867 DPTQ07507 201 aa13.68□□□□□ -0.22
ATG4B-222ENST00000491867 NSUN2Q08J23 767 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATG4B-222ENST00000491867 LAMB3Q13751 1172 aa13.68□□□□□ -0.22
ATG4B-222ENST00000491867 PTPRRQ15256 657 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms