RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 LOXL2Q9Y4K0 774 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 PCDHA13Q9Y5I0 950 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 PCYT1BQ9Y5K3 369 aaPredicted RBP22.83■■□□□ 1.25
COL9A3-213ENST00000489045 A0A0A6YYK5 440 aaPredicted RBP22.82■■□□□ 1.24
COL9A3-213ENST00000489045 RGSL1A5PLK6 1076 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 MT-CYBP00156 380 aaPredicted RBP22.82■■□□□ 1.24
COL9A3-213ENST00000489045 ALDH4A1P30038 563 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 MARCKSL1P49006 195 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 UCNP55089 124 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 CDK18Q07002 472 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 SLC14A2Q15849 920 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 PHF19Q5T6S3 580 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 BZW1Q7L1Q6 419 aaKnown RBP22.82■■□□□ 1.24
COL9A3-213ENST00000489045 CCDC170Q8IYT3 715 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 TFB1MQ8WVM0 346 aaKnown RBP22.82■■□□□ 1.24
COL9A3-213ENST00000489045 RDH14Q9HBH5 336 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 CPNE5Q9HCH3 593 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 PISDQ9UG56 409 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 ZNHIT2Q9UHR6 403 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 SHOC2Q9UQ13 582 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 ZNF711Q9Y462 761 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 PRKAB1Q9Y478 270 aa22.82■■□□□ 1.24
COL9A3-213ENST00000489045 PPM1DO15297 605 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 CPNE6O95741 557 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 SLC4A1P02730 911 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 JMJD7P0C870 316 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 ADCY2Q08462 1091 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 COL9A2Q14055 689 aaPredicted RBP22.81■■□□□ 1.24
COL9A3-213ENST00000489045 SPA17Q15506 151 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 TFDP3Q5H9I0 405 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 ALS2CLQ60I27 953 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 PIM3Q86V86 326 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 JAMLQ86YT9 394 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 KATNAL2Q8IYT4 538 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 TEKT5Q96M29 485 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 NUDT22Q9BRQ3 303 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 SEMA6CQ9H3T2 930 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 MAGEE1Q9HCI5 957 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 PCDHGA7Q9Y5G6 932 aa22.81■■□□□ 1.24
COL9A3-213ENST00000489045 hCG_1818297A0A087WSY0 165 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 TEX51A0A1B0GUA7 166 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 ZW10O43264 779 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 PMPCBO75439 489 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 ITIH1P19827 911 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 SLC5A2P31639 672 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 CYLC1P35663 651 aaPredicted RBP22.8■■□□□ 1.24
COL9A3-213ENST00000489045 GPR3P46089 330 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 WASHC5Q12768 1159 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 C11orf63Q6NUN7 778 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 CHST15Q7LFX5 561 aaPredicted RBP22.8■■□□□ 1.24
COL9A3-213ENST00000489045 CCDC50Q8IVM0 306 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 GPR26Q8NDV2 337 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 SPATA16Q9BXB7 569 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 UBP1Q9NZI7 540 aa22.8■■□□□ 1.24
COL9A3-213ENST00000489045 EIF4E1BA6NMX2 242 aaKnown RBP22.79■■□□□ 1.24
COL9A3-213ENST00000489045 ZRANB2O95218 330 aaKnown RBP eCLIP22.79■■□□□ 1.24
COL9A3-213ENST00000489045 EML2O95834 649 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 CD68P34810 354 aaPredicted RBP22.79■■□□□ 1.24
COL9A3-213ENST00000489045 ZNF75DP51815 510 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 CLN3Q13286 438 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 ZNF569Q5MCW4 686 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 ARHGAP40Q5TG30 622 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 USP53Q70EK8 1073 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 TMC3Q7Z5M5 1100 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 ZC3H18Q86VM9 953 aaKnown RBP22.79■■□□□ 1.24
COL9A3-213ENST00000489045 P3H4Q92791 437 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 TMEM159Q96B96 161 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 HAUS1Q96CS2 278 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 GPR63Q9BZJ6 419 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 RMI1Q9H9A7 625 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 LUC7LQ9NQ29 371 aaKnown RBP22.79■■□□□ 1.24
COL9A3-213ENST00000489045 SSUH2Q9Y2M2 353 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 BAHCC1Q9P281 2608 aa22.79■■□□□ 1.24
COL9A3-213ENST00000489045 FASNP49327 2511 aaKnown RBP22.79■■□□□ 1.24
COL9A3-213ENST00000489045 AHCTF1Q8WYP5 2266 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 TRBV23OR9-2A0A075B6M9 112 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 NDST3O95803 873 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 ACP5P13686 325 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 NFKB1P19838 968 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 CD1CP29017 333 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 ETV5P41161 510 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 DCDC1P59894 354 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 C16orf72Q14CZ0 275 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 CLPPQ16740 277 aaPredicted RBP22.78■■□□□ 1.24
COL9A3-213ENST00000489045 NKAIN2Q5VXU1 208 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 CCDC70Q6NSX1 233 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 ZNF574Q6ZN55 896 aaPredicted RBP22.78■■□□□ 1.24
COL9A3-213ENST00000489045 RCOR2Q8IZ40 523 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 SLC37A2Q8TED4 501 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 KRT35Q92764 455 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 RBM41Q96IZ5 413 aaKnown RBP22.78■■□□□ 1.24
COL9A3-213ENST00000489045 CMKLR1Q99788 373 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 ZSCAN5AQ9BUG6 496 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 ARFGAP3Q9NP61 516 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.78■■□□□ 1.24
COL9A3-213ENST00000489045 ATXN10Q9UBB4 475 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 NFKBIL1Q9UBC1 381 aaPredicted RBP22.78■■□□□ 1.24
COL9A3-213ENST00000489045 KCNK6Q9Y257 313 aa22.78■■□□□ 1.24
COL9A3-213ENST00000489045 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.78■■□□□ 1.24
COL9A3-213ENST00000489045 SPO11Q9Y5K1 396 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms