RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TRIM62Q9BVG3 475 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 SEMA4CQ9C0C4 833 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 OR10A2Q9H208 303 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 DEF6Q9H4E7 631 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 THSD1Q9NS62 852 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 NLGN3Q9NZ94 848 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 NCKIPSDQ9NZQ3 722 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 CFAP45Q9UL16 551 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 PLAAQ9Y263 795 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 PCDHB1Q9Y5F3 818 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 CSNK1G3Q9Y6M4 447 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 U3KQA8 63 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 COL27A1Q8IZC6 1860 aaPredicted RBP5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 AHCTF1Q8WYP5 2266 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 LRRK2Q5S007 2527 aa5.21□□□□□ -1.58
R3HDM1-218ENST00000487294 CXorf51AA0A1B0GTR3 108 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 A0A1B0GVM2 712 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 A0A1W2PNU3 283 aaPredicted RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 NEMP2A6NFY4 417 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 KCNU1A8MYU2 1149 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 TPP1O14773 563 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 SCAMP1O15126 338 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CDC14BO60729 498 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 USP12O75317 370 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 TCEA3O75764 348 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 PIAS2O75928 621 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 IL1BP01584 269 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 TACR2P21452 398 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 NNMTP40261 264 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 ME1P48163 572 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 PSMD8P48556 350 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CSRP3P50461 194 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 DUSP3P51452 185 aaPredicted RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 HGFACQ04756 655 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 SRSF1Q07955 248 aaKnown RBP eCLIP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CCDC15Q0P6D6 951 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 MYBPC3Q14896 1274 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 ISXQ2M1V0 245 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 ZNF284Q2VY69 593 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 ARL13BQ3SXY8 428 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 C5orf22Q49AR2 442 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CBWD6Q4V339 395 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CBWD3Q5JTY5 395 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CBWD5Q5RIA9 395 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 PIP5KL1Q5T9C9 394 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 PRAMEF9Q5VWM5 478 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 RNF219Q5W0B1 726 aaPredicted RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CXorf57Q6NSI4 855 aaKnown RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 MMS22LQ6ZRQ5 1243 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 ZSCAN30Q86W11 494 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CCDC117Q8IWD4 279 aaPredicted RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 GRAMD1CQ8IYS0 662 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 APCDD1Q8J025 514 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 DQX1Q8TE96 717 aaKnown RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 KCNE4Q8WWG9 221 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 OR8D1Q8WZ84 308 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 TFAP2BQ92481 460 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 MFSD3Q96ES6 412 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 PRR11Q96HE9 360 aaPredicted RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 APOLD1Q96LR9 279 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 ZSWIM1Q9BR11 485 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 C12orf65Q9H3J6 166 aaKnown RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CPNE5Q9HCH3 593 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 SAE1Q9UBE0 346 aaPredicted RBP5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 SARDHQ9UL12 918 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 CNTN6Q9UQ52 1028 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 HS3ST2Q9Y278 367 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 OR51B4Q9Y5P0 310 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 HS3ST3A1Q9Y663 406 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 COL12A1Q99715 3063 aa5.2□□□□□ -1.58
R3HDM1-218ENST00000487294 DOCK9Q9BZ29 2069 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 SPTY2D1-AS1A0A0U1RR47 76 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 EME2A4GXA9 379 aaPredicted RBP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 CETN3O15182 167 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 SLC16A3O15427 465 aaKnown RBP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 KLK10O43240 276 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 SDC3O75056 442 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 RTN2O75298 545 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 CSO75390 466 aaKnown RBP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 THEGLP0DJG4 465 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 ALPPL2P10696 532 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 SLC2A3P11169 496 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 EPB41P11171 864 aaKnown RBP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 PFKFB1P16118 471 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 HNRNPA2B1P22626 353 aaKnown RBP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 GDF5P43026 501 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 GPD2P43304 727 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 STK19P49842 368 aaPredicted RBP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 METAP1P53582 386 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 HNRNPKP61978 463 aaKnown RBP eCLIP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 GCNT1Q02742 428 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 CNTN1Q12860 1018 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 HS1BP3Q53T59 392 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 ARHGAP40Q5TG30 622 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 FOXR2Q6PJQ5 311 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 KDM7AQ6ZMT4 941 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 TMEM110Q86TL2 294 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 HORMAD1Q86X24 394 aa5.19□□□□□ -1.58
R3HDM1-218ENST00000487294 PHYKPLQ8IUZ5 450 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms