RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 U3KQA8 63 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 KNL1Q8NG31 2342 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 DNAH14Q0VDD8 3507 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 ANKRD36A6QL64 1941 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 TRABD2BA6NFA1 517 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 C2orf81A6NN90 581 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 BUD23O43709 281 aaKnown RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 CEP104O60308 925 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 IFNB1P01574 187 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 FUCA1P04066 466 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 STIP1P31948 543 aaKnown RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 HMGCLP35914 325 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 SPAM1P38567 509 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 DCDC1P59894 354 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 KLF1Q13351 362 aaPredicted RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 GTF2H3Q13889 308 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 PERM1Q5SV97 790 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 PDPK2PQ6A1A2 396 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 CHST15Q7LFX5 561 aaPredicted RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 PHYKPLQ8IUZ5 450 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 WDR48Q8TAF3 677 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 ATG4AQ8WYN0 398 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 ZCCHC14Q8WYQ9 949 aaKnown RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 CCDC74AQ96AQ1 378 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 EID2BQ96D98 161 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 TTC25Q96NG3 672 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 OR2AG1Q9H205 316 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 CARD9Q9H257 536 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 SPATS2LQ9NUQ6 558 aaKnown RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 VPS18Q9P253 973 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 CNOT6Q9ULM6 557 aaKnown RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 PRKAB1Q9Y478 270 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 PLEKHM1Q9Y4G2 1056 aa12.41□□□□□ -0.42
PTCD1-205ENST00000485746 OAS3Q9Y6K5 1087 aaKnown RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 COL5A1P20908 1838 aaPredicted RBP12.41□□□□□ -0.42
PTCD1-205ENST00000485746 RHPN2P1A8MT19 583 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 E7EVH7 732 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 ZW10O43264 779 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 ZSCAN12O43309 604 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 GRID2O43424 1007 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 LIASO43766 372 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 USP12O75317 370 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 CRTAMO95727 393 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 LPOP22079 712 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-205ENST00000485746 OLIG2Q13516 323 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 SPIDRQ14159 915 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 LONRF2Q1L5Z9 754 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 P3H1Q32P28 736 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 PYCR3Q53H96 274 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 ZNF648Q5T619 568 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-205ENST00000485746 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 FAM151BQ6UXP7 276 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 GSTA5Q7RTV2 222 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 NRROSQ86YC3 692 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 TTC30BQ8N4P2 665 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 CCDC89Q8N998 374 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 GPR156Q8NFN8 814 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 SLC35B2Q8TB61 432 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
PTCD1-205ENST00000485746 GLYATL1Q969I3 302 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 PLEKHG4BQ96PX9 1271 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 LRRC40Q9H9A6 602 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 TRIM39Q9HCM9 518 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 LRIT1Q9P2V4 623 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 ATXN10Q9UBB4 475 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 ARL5AQ9Y689 179 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 CACNA1AO00555 2505 aa12.4□□□□□ -0.42
PTCD1-205ENST00000485746 CNOT1A5YKK6 2376 aaKnown RBP12.4□□□□□ -0.43
PTCD1-205ENST00000485746 CABIN1Q9Y6J0 2220 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 TRBV23OR9-2A0A075B6M9 112 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 GLYATL1P3A0A0U1RQE8 302 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 SNX2O60749 519 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 PPFIA2O75334 1257 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 CSO75390 466 aaKnown RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 ECEL1O95672 775 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 GAS8O95995 478 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 ACP5P13686 325 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 GLB1P16278 677 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 CXCR5P32302 372 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 ADRA1AP35348 466 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 GDF10P55107 478 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 MAZP56270 477 aaKnown RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 CCL7P80098 99 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 PDE1BQ01064 536 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 CYP4F3Q08477 520 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 LRP8Q14114 963 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 TAF1AQ15573 450 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 CHRNA6Q15825 494 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 CRTC3Q6UUV7 619 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 RANBP10Q6VN20 620 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 RBM44Q6ZP01 1051 aaKnown RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 MDM1Q8TC05 714 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 NXPE2Q96DL1 559 aa12.39□□□□□ -0.43
PTCD1-205ENST00000485746 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-205ENST00000485746 GFM1Q96RP9 751 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms