RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MOSPD1Q9UJG1 213 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 DOLKQ9UPQ8 538 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 DRG1Q9Y295 367 aaKnown RBP17.86■□□□□ 0.45
HDAC6-225ENST00000483506 TMEM98Q9Y2Y6 226 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 OAS3Q9Y6K5 1087 aaKnown RBP17.86■□□□□ 0.45
HDAC6-225ENST00000483506 ASPMQ8IZT6 3477 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 ARHGEF17Q96PE2 2063 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-225ENST00000483506 KNTC1P50748 2209 aa17.86■□□□□ 0.45
HDAC6-225ENST00000483506 BPTFQ12830 3046 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 ERI2A8K979 691 aaKnown RBP17.85■□□□□ 0.45
HDAC6-225ENST00000483506 GPR89AB7ZAQ6 455 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 PSMD3O43242 534 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 AP2A1O95782 977 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 GPR89BP0CG08 455 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 MYF5P13349 255 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 ADCY8P40145 1251 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 GNPDA1P46926 289 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 ILF3Q12906 894 aaKnown RBP eCLIP17.85■□□□□ 0.45
HDAC6-225ENST00000483506 LRP8Q14114 963 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 ALS2CLQ60I27 953 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 DOK6Q6PKX4 331 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 TAF8Q7Z7C8 310 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 KYQ8NBH2 561 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 GPR156Q8NFN8 814 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 CCL4L1Q8NHW4 92 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 BRSK1Q8TDC3 778 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 GATA6Q92908 595 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 NAT6Q93015 286 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 GLYATL1Q969I3 302 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 OR2M4Q96R27 311 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 IL26Q9NPH9 171 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 TTC7AQ9ULT0 858 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-225ENST00000483506 GPR34Q9UPC5 381 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 ZNF148Q9UQR1 794 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 ST14Q9Y5Y6 855 aa17.85■□□□□ 0.45
HDAC6-225ENST00000483506 ZFC3H1O60293 1989 aaKnown RBP17.84■□□□□ 0.45
HDAC6-225ENST00000483506 GAPDHSO14556 408 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-225ENST00000483506 CEP104O60308 925 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 ATP1A1P05023 1023 aaKnown RBP17.84■□□□□ 0.45
HDAC6-225ENST00000483506 CXCR5P32302 372 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 FDFT1P37268 417 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 SPAM1P38567 509 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 GSE1Q14687 1217 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 TCEA2Q15560 299 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 CCDC157Q569K6 752 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 GUSBP11Q6P575 273 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 GALNT13Q8IUC8 556 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 SLC35F6Q8N357 371 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 IFI44Q8TCB0 444 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 PBKQ96KB5 322 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 APOL2Q9BQE5 337 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 TRIM39Q9HCM9 518 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 BPIFA1Q9NP55 256 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 HOMER3Q9NSC5 361 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 SMOXQ9NWM0 555 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 TMPRSS11EQ9UL52 423 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 PADI4Q9UM07 663 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 PKP3Q9Y446 797 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 ARL5AQ9Y689 179 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 RP1P56715 2156 aa17.84■□□□□ 0.45
HDAC6-225ENST00000483506 COL27A1Q8IZC6 1860 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-225ENST00000483506 C2orf81A6NN90 581 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 NUAK1O60285 661 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 NOBOXO60393 691 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 USP12O75317 370 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 SLC25A14O95258 325 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 LPOP22079 712 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 MSNP26038 577 aaKnown RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 PDE1BQ01064 536 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 INSM1Q01101 510 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 CTBSQ01459 385 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 SNX1Q13596 522 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 PEX6Q13608 980 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 SPARCL1Q14515 664 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 LONRF2Q1L5Z9 754 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 ATP13A5Q4VNC0 1218 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 CDCP2Q5VXM1 449 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 EFL1Q7Z2Z2 1120 aaKnown RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 C17orf82Q86X59 251 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 PHYKPLQ8IUZ5 450 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 PDCD7Q8N8D1 485 aaKnown RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 FAM46DQ8NEK8 389 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 OR6C4Q8NGE1 309 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 TAAR2Q9P1P5 351 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 ATXN10Q9UBB4 475 aa17.83■□□□□ 0.44
HDAC6-225ENST00000483506 PCYT1BQ9Y5K3 369 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-225ENST00000483506 IGF2RP11717 2491 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 MYLKQ15746 1914 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 CHUKO15111 745 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 STX7O15400 261 aaKnown RBP17.82■□□□□ 0.44
HDAC6-225ENST00000483506 KIF5CO60282 957 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 OPA1O60313 960 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 SUN1O94901 812 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 ASMTLO95671 621 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 CRTAMO95727 393 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 IFNB1P01574 187 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 AK4P27144 223 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-225ENST00000483506 ACTN2P35609 894 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 ZNF140P52738 457 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-225ENST00000483506 SEMA5AQ13591 1074 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms