RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 NR1I3Q14994 352 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 SLMAPQ14BN4 828 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 UGP2Q16851 508 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 WSCD2Q2TBF2 565 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 ODF2Q5BJF6 829 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 CERCAMQ5T4B2 595 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 OGFOD3Q6PK18 319 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 LVRNQ6Q4G3 990 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 ENPP7Q6UWV6 458 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 RD3Q7Z3Z2 195 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 SPRED1Q7Z699 444 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 GKN2Q86XP6 184 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 FSTL5Q8N475 847 aaPredicted RBP6.65□□□□□ -1.34
VCP-205ENST00000479300 COG1Q8WTW3 980 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 OR1E3Q8WZA6 343 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 SYN2Q92777 582 aaPredicted RBP6.65□□□□□ -1.34
VCP-205ENST00000479300 NKD1Q969G9 470 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 TMEM74Q96NL1 305 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 ZNF599Q96NL3 588 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 KCTD15Q96SI1 283 aaPredicted RBP6.65□□□□□ -1.34
VCP-205ENST00000479300 NAPGQ99747 312 aaPredicted RBP6.65□□□□□ -1.34
VCP-205ENST00000479300 SH3GL2Q99962 352 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 KLC2Q9H0B6 622 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 HSD3B7Q9H2F3 369 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 ADNPQ9H2P0 1102 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 NOL6Q9H6R4 1146 aaKnown RBP6.65□□□□□ -1.34
VCP-205ENST00000479300 LRRC19Q9H756 370 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 HOMER3Q9NSC5 361 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 KLC4Q9NSK0 619 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 KCTD5Q9NXV2 234 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 LHX3Q9UBR4 397 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 MOSPD1Q9UJG1 213 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 APPL1Q9UKG1 709 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 ATP8A1Q9Y2Q0 1164 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 OR1A2Q9Y585 309 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 ANKRD36A6QL64 1941 aa6.65□□□□□ -1.34
VCP-205ENST00000479300 ABCA12Q86UK0 2595 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CFAP69A5D8W1 941 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 POM121CA8CG34 1229 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 TMX2-CTNND1H3BSU7 103 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 K7EM74 188 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 MYO1FO00160 1098 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 DDX3XO00571 662 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCP-205ENST00000479300 INSIG1O15503 277 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ZW10O43264 779 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 DUX1O43812 170 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 LRCH4O75427 683 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 RASSF9O75901 435 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 PCCBP05166 539 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ELFN1P0C7U0 828 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 RNF224P0DH78 156 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 FGF3P11487 239 aaPredicted RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 CYP2A6P11509 494 aaPredicted RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 LIFP15018 202 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CA4P22748 312 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 GCGRP47871 477 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 SCNN1BP51168 640 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CLNS1AP54105 237 aaKnown RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 CDH6P55285 790 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 SRP54P61011 504 aaKnown RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 CKAP4Q07065 602 aaKnown RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 ACTN3Q08043 901 aaPredicted RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 ITKQ08881 620 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 NSUN2Q08J23 767 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCP-205ENST00000479300 MTM1Q13496 603 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 HLTFQ14527 1009 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCP-205ENST00000479300 NFATC4Q14934 902 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ACOX1Q15067 660 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 RBBP5Q15291 538 aaKnown RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 SNCBQ16143 134 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 PDCD2Q16342 344 aaPredicted RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 CA9Q16790 459 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 C4orf17Q53FE4 359 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CEP85LQ5SZL2 805 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CCDC122Q5T0U0 273 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 SPECC1LQ69YQ0 1117 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 TLDC1Q6P9B6 456 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 BORAQ6PGQ7 559 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CAMK1DQ8IU85 385 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 MAP7D3Q8IWC1 876 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 PELI3Q8N2H9 469 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ATPAF2Q8N5M1 289 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 TC2NQ8N9U0 490 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 PLA2G15Q8NCC3 412 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 TSEN2Q8NCE0 465 aaKnown RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 RCBTB1Q8NDN9 531 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CCL4L1Q8NHW4 92 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 BCAS4Q8TDM0 211 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 PDCD6IPQ8WUM4 868 aaKnown RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 TEKT4Q8WW24 435 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 CTNNBL1Q8WYA6 563 aaPredicted RBP6.64□□□□□ -1.35
VCP-205ENST00000479300 MIB2Q96AX9 1013 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 WDR92Q96MX6 357 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 RBM15Q96T37 977 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCP-205ENST00000479300 NUDT22Q9BRQ3 303 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 APOOQ9BUR5 198 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 ISCUQ9H1K1 167 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 RDH14Q9HBH5 336 aa6.64□□□□□ -1.35
VCP-205ENST00000479300 FGF22Q9HCT0 170 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms