RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, human

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-208	ENST00000477928	FAM83D	Q9H4H8	585 aa		13.73	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	RMI1	Q9H9A7	625 aa		13.73	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	CARS2	Q9HA77	564 aa	Known RBP	13.73	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.73	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	VPS18	Q9P253	973 aa		13.73	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.73	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	LHX6	Q9UPM6	363 aa		13.73	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928		A0A1W2PQM1	296 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	INPP4B	O15327	924 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	PPFIA2	O75334	1257 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	MT-CYB	P00156	380 aa	Predicted RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	SLC4A1	P02730	911 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	FGF1	P05230	155 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	PNLIP	P16233	465 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	NFKB1	P19838	968 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	RBL1	P28749	1068 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	HMGCL	P35914	325 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GNPDA1	P46926	289 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	MAZ	P56270	477 aa	Known RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	EIF3E	P60228	445 aa	Known RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	CCL7	P80098	99 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	KLF1	Q13351	362 aa	Predicted RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	LRP8	Q14114	963 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	PRPSAP1	Q14558	356 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	PCSK7	Q16549	785 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ISX	Q2M1V0	245 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	SEL1L2	Q5TEA6	688 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	OGFOD3	Q6PK18	319 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	KDELC1	Q6UW63	502 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	LYSMD3	Q7Z3D4	306 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928		Q8N9G6	341 aa	Predicted RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GPBAR1	Q8TDU6	330 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	COX14	Q96I36	57 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GSDMC	Q9BYG8	508 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	NRSN2	Q9GZP1	204 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GBA3	Q9H227	469 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GRPEL1	Q9HAV7	217 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ARFGAP3	Q9NP61	516 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	UBP1	Q9NZI7	540 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	RSPH14	Q9UHP6	348 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	SUFU	Q9UMX1	484 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GUCA1B	Q9UMX6	200 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	PRKAB1	Q9Y478	270 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	OAS3	Q9Y6K5	1087 aa	Known RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	CAPN6	Q9Y6Q1	641 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ACACA	Q13085	2346 aa		13.72	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	LOC400499	M0QZD8	3231 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ASXL3	Q9C0F0	2248 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	C5orf60	A6NFR6	353 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	TCEA3	O75764	348 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ATP1A1	P05023	1023 aa	Known RBP	13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	STIP1	P31948	543 aa	Known RBP	13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	EIF2S3	P41091	472 aa	Known RBP	13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	WNT3A	P56704	352 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GABRE	P78334	506 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	C3orf38	Q5JPI3	329 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ZNF648	Q5T619	568 aa	Predicted RBP	13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	AADACL2	Q6P093	401 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	DARS2	Q6PI48	645 aa	Known RBP	13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	TMPRSS9	Q7Z410	1059 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	KLHDC8B	Q8IXV7	354 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	TRAM1L1	Q8N609	369 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GPR156	Q8NFN8	814 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	TRIM58	Q8NG06	486 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	MRGPRX2	Q96LB1	330 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	PLEKHG4B	Q96PX9	1271 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	FAM118B	Q9BPY3	351 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	FSD1L	Q9BXM9	530 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	FOXP3	Q9BZS1	431 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	CARD9	Q9H257	536 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	TRIM10	Q9UDY6	481 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	SHOC2	Q9UQ13	582 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ZNF711	Q9Y462	761 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	SPO11	Q9Y5K1	396 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	ENTPD2	Q9Y5L3	495 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	RNF215	Q9Y6U7	377 aa		13.71	□□□□□ -0.21
SOX2-OT-208	ENST00000477928	GOLGA6L3	A6NEY3	463 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	FADS2P1	A8MWK0	482 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	NTN3	O00634	580 aa	Predicted RBP	13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	ZW10	O43264	779 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	PMPCB	O75439	489 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	FTCD	O95954	541 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	RPLP0	P05388	317 aa	Known RBP	13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	CCZ1B	P86790	482 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	CCZ1	P86791	482 aa	Predicted RBP	13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	PDE1B	Q01064	536 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	ILF3	Q12906	894 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	SLC1A5	Q15758	541 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	ANKRD20A2	Q5SQ80	823 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	MEI1	Q5TIA1	1274 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	ANKRD20A1	Q5TYW2	823 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	ANKRD20A3	Q5VUR7	823 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	ALS2CL	Q60I27	953 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	FOXR1	Q6PIV2	292 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	SLC30A9	Q6PML9	568 aa		13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	NAF1	Q96HR8	494 aa	Known RBP	13.7	□□□□□ -0.22
SOX2-OT-208	ENST00000477928	SPATA13	Q96N96	652 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms