RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 HERC6Q8IVU3 1022 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 MIGA1Q8NAN2 632 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 SIL1Q9H173 461 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 UPF3AQ9H1J1 476 aaKnown RBP4.91□□□□□ -1.62
PRKD3-208ENST00000475912 CXorf56Q9H5V9 222 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 C6orf106Q9H6K1 298 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-208ENST00000475912 CHODLQ9H9P2 273 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 SAYSD1Q9NPB0 183 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 ZHX1Q9UKY1 873 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-208ENST00000475912 CNPY2Q9Y2B0 182 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 SRPRBQ9Y5M8 271 aaKnown RBP4.91□□□□□ -1.62
PRKD3-208ENST00000475912 CHD6Q8TD26 2715 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 BAHCC1Q9P281 2608 aa4.91□□□□□ -1.62
PRKD3-208ENST00000475912 CACNA1GO43497 2377 aa4.9□□□□□ -1.62
PRKD3-208ENST00000475912 TECTAO75443 2155 aa4.9□□□□□ -1.62
PRKD3-208ENST00000475912 ASAP2O43150 1006 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 METTL18O95568 372 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 MMP3P08254 477 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 PAX3P23760 479 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 PTPN9P43378 593 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 MTNR1AP48039 350 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 MCM2P49736 904 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 NUDT6P53370 316 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 VCPP55072 806 aaKnown RBP4.9□□□□□ -1.63
PRKD3-208ENST00000475912 TIMM10P62072 90 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 ARHGAP8P85298 464 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 BEX3Q00994 111 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 IL13RA2Q14627 380 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 IZUMO4Q1ZYL8 232 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 C8orf82Q6P1X6 216 aaPredicted RBP4.9□□□□□ -1.63
PRKD3-208ENST00000475912 CXCL17Q6UXB2 119 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 FJX1Q86VR8 437 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 FOXP4Q8IVH2 680 aaPredicted RBP4.9□□□□□ -1.63
PRKD3-208ENST00000475912 SMAP1Q8IYB5 467 aaPredicted RBP4.9□□□□□ -1.63
PRKD3-208ENST00000475912 OR14A16Q8NHC5 309 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 LMO3Q8TAP4 145 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 TMEM163Q8TC26 289 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 ATOH1Q92858 354 aaPredicted RBP4.9□□□□□ -1.63
PRKD3-208ENST00000475912 CTDSP1Q9GZU7 261 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 CDT1Q9H211 546 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 AATFQ9NY61 560 aaKnown RBP eCLIP4.9□□□□□ -1.63
PRKD3-208ENST00000475912 RAI14Q9P0K7 980 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 HMG20BQ9P0W2 317 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 MTUS1Q9ULD2 1270 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 ZNF292O60281 2723 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 SMCHD1A6NHR9 2005 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 ASPMQ8IZT6 3477 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 ASTN1O14525 1302 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 CACNA1HO95180 2353 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 PLXNA3P51805 1871 aa4.9□□□□□ -1.63
PRKD3-208ENST00000475912 OR6C68A6NDL8 312 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 PRR23AA6NEV1 266 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 TMEM221A6NGB7 291 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 M0R296 226 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 FAM155BO75949 473 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 CIAO1O76071 339 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 SOX30O94993 753 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 LDHCP07864 332 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 NAGAP17050 411 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 YWHAQP27348 245 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 SHMT1P34896 483 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 ADD2P35612 726 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 AMTP48728 403 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 AARSP49588 968 aaKnown RBP eCLIP4.89□□□□□ -1.63
PRKD3-208ENST00000475912 ART1P52961 327 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 RRP1P56182 461 aaKnown RBP4.89□□□□□ -1.63
PRKD3-208ENST00000475912 PSMC6P62333 389 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 GSTO1P78417 241 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 ITGA7Q13683 1181 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 ACVR2BQ13705 512 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 POSTNQ15063 836 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 PLCB4Q15147 1175 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 MON1BQ7L1V2 547 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 ZNF354CQ86Y25 554 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 CLIP4Q8N3C7 705 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 GALNT15Q8N3T1 639 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 TEX45Q8NA69 505 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 PHOSPHO2Q8TCD6 241 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 TRAPPC12Q8WVT3 735 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 THAP4Q8WY91 577 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 TMEM18Q96B42 140 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 TWSG1Q9GZX9 223 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 USP44Q9H0E7 712 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 HOXC10Q9NYD6 342 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 GRHL1Q9NZI5 618 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 NLKQ9UBE8 527 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 IL36RNQ9UBH0 155 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 HDAC6Q9UBN7 1215 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 GPR52Q9Y2T5 361 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 PCDHGB1Q9Y5G3 927 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 GVINP1Q7Z2Y8 2422 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 KMT2EQ8IZD2 1858 aa4.89□□□□□ -1.63
PRKD3-208ENST00000475912 CHD8Q9HCK8 2581 aa4.88□□□□□ -1.63
PRKD3-208ENST00000475912 A0A1B0GUL7 405 aa4.88□□□□□ -1.63
PRKD3-208ENST00000475912 LINC01553A4QN01 128 aa4.88□□□□□ -1.63
PRKD3-208ENST00000475912 IFITM10A6NMD0 228 aa4.88□□□□□ -1.63
PRKD3-208ENST00000475912 STX16-NPEPL1H3BU86 382 aa4.88□□□□□ -1.63
PRKD3-208ENST00000475912 STX16O14662 325 aa4.88□□□□□ -1.63
PRKD3-208ENST00000475912 ITM2AO43736 263 aa4.88□□□□□ -1.63
PRKD3-208ENST00000475912 FLOT1O75955 427 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms