RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 LPOP22079 712 aaPredicted RBP14.34□□□□□ -0.11
ABCF3-211ENST00000475728 SPAM1P38567 509 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 GNPDA1P46926 289 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 LMAN1P49257 510 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 CCDC157Q569K6 752 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 ALS2CLQ60I27 953 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 KCTD11Q693B1 232 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 DOK6Q6PKX4 331 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 GALNT13Q8IUC8 556 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 RASGEF1CQ8N431 466 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 NAT6Q93015 286 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 GLYATL1Q969I3 302 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 OR2M4Q96R27 311 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 AGAP2Q99490 1192 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 BOCQ9BWV1 1114 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 MRPL40Q9NQ50 206 aaKnown RBP14.34□□□□□ -0.11
ABCF3-211ENST00000475728 TOR4AQ9NXH8 423 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 SUFUQ9UMX1 484 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 GPR34Q9UPC5 381 aa14.34□□□□□ -0.11
ABCF3-211ENST00000475728 FRYQ5TBA9 3013 aa14.33□□□□□ -0.11
ABCF3-211ENST00000475728 GOLGA6L10A0A0M3HER8 536 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 FADS2P1A8MWK0 482 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 AURKAO14965 403 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 SLC25A14O95258 325 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-211ENST00000475728 TCP1P17987 556 aaKnown RBP14.33□□□□□ -0.12
ABCF3-211ENST00000475728 DNAJC3Q13217 504 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 LAMB3Q13751 1172 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 ITGA9Q13797 1035 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 LRP8Q14114 963 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 CHCHD4Q8N4Q1 142 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 PDCD7Q8N8D1 485 aaKnown RBP14.33□□□□□ -0.12
ABCF3-211ENST00000475728 ARL10Q8N8L6 244 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 PNPLA1Q8N8W4 532 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 OR6C4Q8NGE1 309 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 GPBAR1Q8TDU6 330 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 VPS35Q96QK1 796 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 OSBPL9Q96SU4 736 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 APOL2Q9BQE5 337 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 ZCCHC2Q9C0B9 1178 aaKnown RBP14.33□□□□□ -0.12
ABCF3-211ENST00000475728 TMEM168Q9H0V1 697 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 TRIM39Q9HCM9 518 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 BPIFA1Q9NP55 256 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 RAB6BQ9NRW1 208 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 APPL1Q9UKG1 709 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.12
ABCF3-211ENST00000475728 SNX12Q9UMY4 172 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 TMEM98Q9Y2Y6 226 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 NEUROG3Q9Y4Z2 214 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 CEP295Q9C0D2 2601 aa14.33□□□□□ -0.12
ABCF3-211ENST00000475728 PKD1L2Q7Z442 2459 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 GLYATL1P3A0A0U1RQE8 302 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 HYAL3O43820 417 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-211ENST00000475728 VEGFDO43915 354 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 USP12O75317 370 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 ATP1A1P05023 1023 aaKnown RBP14.32□□□□□ -0.12
ABCF3-211ENST00000475728 HADHAP40939 763 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 POLD2P49005 469 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 GNG11P61952 73 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 SEMA5AQ13591 1074 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 SPARCL1Q14515 664 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 PYCR3Q53H96 274 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 DENND5AQ6IQ26 1287 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 TRIM74Q86UV6 250 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 TMPRSS12Q86WS5 348 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 FAM46DQ8NEK8 389 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 ACTRT1Q8TDG2 376 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-211ENST00000475728 ETNK1Q9HBU6 452 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 IL26Q9NPH9 171 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 ZNHIT2Q9UHR6 403 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 GPSM3Q9Y4H4 160 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 ARL5AQ9Y689 179 aa14.32□□□□□ -0.12
ABCF3-211ENST00000475728 CPED1A4D0V7 1026 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 EME2A4GXA9 379 aaPredicted RBP14.31□□□□□ -0.12
ABCF3-211ENST00000475728 AP3B1O00203 1094 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 SUN1O94901 812 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 CELA2BP08218 269 aaPredicted RBP14.31□□□□□ -0.12
ABCF3-211ENST00000475728 ADCY8P40145 1251 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 CDH17Q12864 832 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 GTF2H3Q13889 308 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 LDLRAP1Q5SW96 308 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 DHRS13Q6UX07 377 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 PPP1R21Q6ZMI0 780 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 MARK2Q7KZI7 788 aaKnown RBP14.31□□□□□ -0.12
ABCF3-211ENST00000475728 TMPRSS7Q7RTY8 843 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 SLC35F3Q8IY50 421 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 PRELID2Q8N945 189 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 DNAAF3Q8N9W5 541 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 WDR48Q8TAF3 677 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 GDAP1Q8TB36 358 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 IFI44Q8TCB0 444 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 MAGOHBQ96A72 148 aaKnown RBP14.31□□□□□ -0.12
ABCF3-211ENST00000475728 TTC25Q96NG3 672 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 SCNM1Q9BWG6 230 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 ABCG4Q9H172 646 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 DPEP2Q9H4A9 486 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 CAAP1Q9H8G2 361 aa14.31□□□□□ -0.12
ABCF3-211ENST00000475728 EIF2B3Q9NR50 452 aaKnown RBP14.31□□□□□ -0.12
ABCF3-211ENST00000475728 GULP1Q9UBP9 304 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms