RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SLC39A1Q9NY26 324 aa9.93□□□□□ -0.82
NUP50-214ENST00000469163 GTPBP10A4D1E9 387 aaKnown RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 H3BNH8 94 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 PROCP04070 461 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 PTPN1P18031 435 aaKnown RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 FBXO43Q4G163 708 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 TTC39BQ5VTQ0 682 aaPredicted RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 TTC33Q6PID6 262 aaPredicted RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 TMEM173Q86WV6 379 aaPredicted RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 POC5Q8NA72 575 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 SIMC1Q8NDZ2 872 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 GTF2H4Q92759 462 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 ST6GALNAC4Q9H4F1 302 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 MANSC1Q9H8J5 431 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 NOCTQ9UK39 431 aaKnown RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 PSMD13Q9UNM6 376 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 CACNG2Q9Y698 323 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 TRIOO75962 3097 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 PRR5-ARHGAP8B1AHC4 643 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 TM9SF1O15321 606 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 CPNE3O75131 537 aaKnown RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 ATG13O75143 517 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 TMEM253P0C7T8 217 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 STMN1P16949 149 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 ITGA2P17301 1181 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 PRKAR1BP31321 381 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 MTHFRP42898 656 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 MAPK12P53778 367 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 JAM2P57087 298 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 ERVK-21P61565 698 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 ARHGAP8P85298 464 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 IKBKEQ14164 716 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 HERC3Q15034 1050 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 ATG16L1Q676U5 607 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 CCDC36Q8IYA8 594 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 DEFB106AQ8N104 65 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 FAM47BQ8NA70 645 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 PSMA8Q8TAA3 256 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 PCED1BQ96HM7 432 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 SNX18Q96RF0 628 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 TUBA1CQ9BQE3 449 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 XYLT2Q9H1B5 865 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 PNPLA3Q9NST1 481 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 CD274Q9NZQ7 290 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 MARCOQ9UEW3 520 aaPredicted RBP9.92□□□□□ -0.82
NUP50-214ENST00000469163 CYTH4Q9UIA0 394 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 ITGA11Q9UKX5 1188 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 POMPQ9Y244 141 aa9.92□□□□□ -0.82
NUP50-214ENST00000469163 A0A0X1KG70 313 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 SH3D21A4FU49 640 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 OR5K3A6NET4 321 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 DFFAO00273 331 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 SLC22A1O15245 554 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 PRMT3O60678 531 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 DRG2P55039 364 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 NOMO3P69849 1222 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 IFITM3Q01628 133 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 PMS2P3Q13401 168 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 MAMLD1Q13495 774 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 ELOAQ14241 798 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 PKN2Q16513 984 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 CACHD1Q5VU97 1274 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 HFE2Q6ZVN8 426 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 SLC24A5Q71RS6 500 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 AMIGO1Q86WK6 493 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 MICU2Q8IYU8 434 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 RASGEF1CQ8N431 466 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TEX47Q8TBZ9 253 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 SLC9A6Q92581 669 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 WDR12Q9GZL7 423 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 TINAGL1Q9GZM7 467 aaPredicted RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 SLC6A17Q9H1V8 727 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 CHST7Q9NS84 486 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TBC1D13Q9NVG8 400 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 VWA7Q9Y334 891 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 RNF11Q9Y3C5 154 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TET1Q8NFU7 2136 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 ZNF701M0R085 212 aaPredicted RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 NDUFA2O43678 99 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TSPAN3O60637 253 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 SELLP14151 372 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 HOXB1P14653 301 aaPredicted RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 AXLP30530 894 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 DEFB103AP81534 67 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 RAB39AQ14964 217 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 ESCO2Q56NI9 601 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 C10orf120Q5SQS8 335 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 RNASEH2BQ5TBB1 312 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 MFSD7Q6UXD7 560 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 ENOSF1Q7L5Y1 443 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 OR2T3Q8NH03 318 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 MYLPFQ96A32 169 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TESCQ96BS2 214 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 SH3YL1Q96HL8 342 aaPredicted RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 CLSTN3Q9BQT9 956 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 DIABLOQ9NR28 239 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 PCDHGC3Q9UN70 934 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms