RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ALS2CLQ60I27 953 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 PDZD3Q86UT5 571 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 ARL14Q8N4G2 192 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 KIAA1524Q8TCG1 905 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 HTR3CQ8WXA8 447 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 ALG3Q92685 438 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 GRAMD1AQ96CP6 724 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 BAG1Q99933 345 aaPredicted RBP21.61■■□□□ 1.05
LIME1-203ENST00000465591 CDH19Q9H159 772 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 ARFGAP3Q9NP61 516 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 KLHL8Q9P2G9 620 aaPredicted RBP21.61■■□□□ 1.05
LIME1-203ENST00000465591 TRIM10Q9UDY6 481 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 IGSF10Q6WRI0 2623 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 RGSL1A5PLK6 1076 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 B4GAT1O43505 415 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 NUDT21O43809 227 aaKnown RBP21.6■■□□□ 1.05
LIME1-203ENST00000465591 IPO7O95373 1038 aaKnown RBP21.6■■□□□ 1.05
LIME1-203ENST00000465591 EML2O95834 649 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 PNLIPP16233 465 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 CTNNA2P26232 953 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 CHRNA4P43681 627 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 NAP1L1P55209 391 aaKnown RBP21.6■■□□□ 1.05
LIME1-203ENST00000465591 WNT3AP56704 352 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 B4GALNT1Q00973 533 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 CCDC173Q0VFZ6 552 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 ZNF648Q5T619 568 aaPredicted RBP21.6■■□□□ 1.05
LIME1-203ENST00000465591 SPC24Q8NBT2 197 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 ZNF578Q96N58 590 aaPredicted RBP21.6■■□□□ 1.05
LIME1-203ENST00000465591 DESI2Q9BSY9 194 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 FAM153AQ9UHL3 310 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 AHCTF1Q8WYP5 2266 aa21.6■■□□□ 1.05
LIME1-203ENST00000465591 LOC285095A0A1B0GVY8 99 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 APOC4-APOC2K7ER74 178 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 MTSS1O43312 755 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 APOC2P02655 101 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 RBL1P28749 1068 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 ABCG1P45844 678 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 FOXR1Q6PIV2 292 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 IGF2-ASQ6U949 168 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 PID1Q7Z2X4 250 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 ZNF438Q7Z4V0 828 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 GALNT13Q8IUC8 556 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 LSMEM2Q8N112 164 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 ACTL9Q8TC94 416 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 MRGPRX2Q96LB1 330 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 SLC46A1Q96NT5 459 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 FCRL5Q96RD9 977 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 FAM118BQ9BPY3 351 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 GORASP1Q9BQQ3 440 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 OSBPL8Q9BZF1 889 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 GPR63Q9BZJ6 419 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 EPB41L5Q9HCM4 733 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 VPS18Q9P253 973 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 PCDHGA8Q9Y5G5 932 aa21.59■■□□□ 1.05
LIME1-203ENST00000465591 CCDC187A0A096LP49 1063 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 HACD1B0YJ81 288 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 PPM1DO15297 605 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 BPIP17213 487 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 OR1D5P58170 312 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 DCDC1P59894 354 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 COPS2P61201 443 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 OTUD4Q01804 1114 aaKnown RBP21.58■■□□□ 1.05
LIME1-203ENST00000465591 WDR36Q8NI36 951 aaKnown RBP21.58■■□□□ 1.05
LIME1-203ENST00000465591 LIN37Q96GY3 246 aaPredicted RBP21.58■■□□□ 1.05
LIME1-203ENST00000465591 NAF1Q96HR8 494 aaKnown RBP21.58■■□□□ 1.05
LIME1-203ENST00000465591 SPATA16Q9BXB7 569 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 ATXN10Q9UBB4 475 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 NFKBIL1Q9UBC1 381 aaPredicted RBP21.58■■□□□ 1.05
LIME1-203ENST00000465591 ZNHIT2Q9UHR6 403 aa21.58■■□□□ 1.05
LIME1-203ENST00000465591 H7C0C1 242 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 AGRPO00253 132 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 PYGMP11217 842 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 HGFP14210 728 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 HOXB3P14651 431 aaPredicted RBP21.57■■□□□ 1.04
LIME1-203ENST00000465591 CDC25BP30305 580 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 PTPN7P35236 360 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 ATP5OP48047 213 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 INHBCP55103 352 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 ERVPABLB-1P60509 514 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 XRCC4Q13426 336 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 NR1D2Q14995 579 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 SIRPB2Q5JXA9 342 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 CHST15Q7LFX5 561 aaPredicted RBP21.57■■□□□ 1.04
LIME1-203ENST00000465591 KIAA1328Q86T90 577 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 SPACA3Q8IXA5 215 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 TTC30BQ8N4P2 665 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 SLC25A41Q8N5S1 370 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 CALR3Q96L12 384 aaKnown RBP21.57■■□□□ 1.04
LIME1-203ENST00000465591 VAT1Q99536 393 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 RDH14Q9HBH5 336 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 BPIFA1Q9NP55 256 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 TMPRSS11EQ9UL52 423 aa21.57■■□□□ 1.04
LIME1-203ENST00000465591 TRBV23OR9-2A0A075B6M9 112 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 MACROD2A1Z1Q3 448 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 CCDC66A2RUB6 948 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 CDRT15L2A8MXV6 281 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 RRP8O43159 456 aaKnown RBP21.56■■□□□ 1.04
LIME1-203ENST00000465591 ZNF8P17098 575 aaPredicted RBP21.56■■□□□ 1.04
LIME1-203ENST00000465591 CCKBRP32239 447 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 RWDD2BP57060 319 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms