RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 LIMK2P53671 638 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 SRSF6Q13247 344 aaKnown RBP15.33■□□□□ 0.04
HOXB3-204ENST00000465120 GALNT3Q14435 633 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 NR1D2Q14995 579 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 QPCTQ16769 361 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 SNAP47Q5SQN1 464 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 VASH2Q86V25 355 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 RFX6Q8HWS3 928 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 CCDC112Q8NEF3 446 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 SLC37A2Q8TED4 501 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 JPH3Q8WXH2 748 aaPredicted RBP15.33■□□□□ 0.04
HOXB3-204ENST00000465120 SGF29Q96ES7 293 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 COX14Q96I36 57 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 CCDC42Q96M95 316 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 CEP41Q9BYV8 373 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 SEMA4CQ9C0C4 833 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 STN1Q9H668 368 aaKnown RBP15.33■□□□□ 0.04
HOXB3-204ENST00000465120 SCN8AQ9UQD0 1980 aa15.33■□□□□ 0.04
HOXB3-204ENST00000465120 SSU72P8A0A1W2PR75 194 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 KRT1P04264 644 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 ACP5P13686 325 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 DYNLT1P63172 113 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 PPIDQ08752 370 aaKnown RBP15.32■□□□□ 0.04
HOXB3-204ENST00000465120 ZBTB17Q13105 803 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 TRA2AQ13595 282 aaKnown RBP eCLIP15.32■□□□□ 0.04
HOXB3-204ENST00000465120 PCSK7Q16549 785 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 FAM182AQ5T1J6 154 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 FAM129CQ86XR2 697 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 RAVER1Q8IY67 606 aaKnown RBP15.32■□□□□ 0.04
HOXB3-204ENST00000465120 AGBL5Q8NDL9 886 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 OR4D9Q8NGE8 314 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 OR10G6Q8NH81 332 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 RNF25Q96BH1 459 aaPredicted RBP15.32■□□□□ 0.04
HOXB3-204ENST00000465120 MED8Q96G25 268 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 AGAP3Q96P47 875 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 TAAR9Q96RI9 348 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 LYSMD1Q96S90 227 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 DNAJC7Q99615 494 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 DPYSL5Q9BPU6 564 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 SPATA16Q9BXB7 569 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 ZFYVE1Q9HBF4 777 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 SPTLC3Q9NUV7 552 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 VPS18Q9P253 973 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 KCNK6Q9Y257 313 aa15.32■□□□□ 0.04
HOXB3-204ENST00000465120 OAS3Q9Y6K5 1087 aaKnown RBP15.32■□□□□ 0.04
HOXB3-204ENST00000465120 RGSL1A5PLK6 1076 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 A8MU76 341 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 STMND1H3BQB6 276 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
HOXB3-204ENST00000465120 DNAJC6O75061 913 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 MMP2P08253 660 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 PIRTP0C851 137 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 FGF3P11487 239 aaPredicted RBP15.31■□□□□ 0.04
HOXB3-204ENST00000465120 ZFXP17010 805 aaPredicted RBP15.31■□□□□ 0.04
HOXB3-204ENST00000465120 CD82P27701 267 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 ARHGAP25P42331 645 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 MAPK9P45984 424 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 GPLD1P80108 840 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 IFI35P80217 286 aaPredicted RBP15.31■□□□□ 0.04
HOXB3-204ENST00000465120 HHEXQ03014 270 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 NFATC2Q13469 925 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 PDK1Q15118 436 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
HOXB3-204ENST00000465120 ALS2CLQ60I27 953 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 CCDC70Q6NSX1 233 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 TMEM71Q6P5X7 295 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 NPNTQ6UXI9 565 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 LYSMD3Q7Z3D4 306 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 NT5DC3Q86UY8 548 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 RHOT2Q8IXI1 618 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 PLD5Q8N7P1 536 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 CNTD1Q8N815 330 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 ART4Q93070 314 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 WDR24Q96S15 920 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 CHP1Q99653 195 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 GPR63Q9BZJ6 419 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 RMI1Q9H9A7 625 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 NHEJ1Q9H9Q4 299 aaPredicted RBP15.31■□□□□ 0.04
HOXB3-204ENST00000465120 ARFGAP3Q9NP61 516 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 ABHD10Q9NUJ1 306 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 SLC39A1Q9NY26 324 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 TMEM9Q9P0T7 183 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 CNOT6Q9ULM6 557 aaKnown RBP15.31■□□□□ 0.04
HOXB3-204ENST00000465120 SHOC2Q9UQ13 582 aa15.31■□□□□ 0.04
HOXB3-204ENST00000465120 EFCAB7A8K855 629 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 FADS2P1A8MWK0 482 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 GRID2O43424 1007 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 DUX1O43812 170 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 SLC25A14O95258 325 aaPredicted RBP15.3■□□□□ 0.04
HOXB3-204ENST00000465120 EML2O95834 649 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 SLC2A4P14672 509 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 FASLGP48023 281 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 ATP1A2P50993 1020 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 SKOR2Q2VWA4 1001 aaPredicted RBP15.3■□□□□ 0.04
HOXB3-204ENST00000465120 ZNF569Q5MCW4 686 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 HENMT1Q5T8I9 393 aaKnown RBP15.3■□□□□ 0.04
HOXB3-204ENST00000465120 SLC9A4Q6AI14 798 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 SLC9B2Q86UD5 537 aa15.3■□□□□ 0.04
HOXB3-204ENST00000465120 SFRP1Q8N474 314 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms