RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PCBP4P57723 403 aaKnown RBP21.06■□□□□ 0.96
HMGB3-205ENST00000455596 DCDC1P59894 354 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 LRP8Q14114 963 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 CCDC181Q5TID7 509 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 NAGSQ8N159 534 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 ZNF567Q8N184 647 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 LIN37Q96GY3 246 aaPredicted RBP21.06■□□□□ 0.96
HMGB3-205ENST00000455596 TMEM74Q96NL1 305 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 SPATA16Q9BXB7 569 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 RMI1Q9H9A7 625 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 ASCL3Q9NQ33 180 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 THSD1Q9NS62 852 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 ZNHIT2Q9UHR6 403 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 EFR3BQ9Y2G0 817 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 PLEKHM1Q9Y4G2 1056 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 OAS3Q9Y6K5 1087 aaKnown RBP21.06■□□□□ 0.96
HMGB3-205ENST00000455596 ZZEF1O43149 2961 aa21.06■□□□□ 0.96
HMGB3-205ENST00000455596 A0A1W2PNU3 283 aaPredicted RBP21.05■□□□□ 0.96
HMGB3-205ENST00000455596 RHPN2P1A8MT19 583 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 H7C0C1 242 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ZW10O43264 779 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 DNAJC6O75061 913 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ITPKBP27987 946 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 CDC25BP30305 580 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 CETN2P41208 172 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ATP5OP48047 213 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 INHBCP55103 352 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 RWDD2BP57060 319 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 BIRC2Q13490 618 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 NOMO1Q15155 1222 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ALS2CLQ60I27 953 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 FOXR1Q6PIV2 292 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 KDELC1Q6UW63 502 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 B3GNT8Q7Z7M8 397 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 TMEM139Q8IV31 216 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 TXLNBQ8N3L3 684 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ARL14Q8N4G2 192 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 GPR26Q8NDV2 337 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ZNF248Q8NDW4 579 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 SLC46A1Q96NT5 459 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 FCRL5Q96RD9 977 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ZSCAN5AQ9BUG6 496 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 STRADBQ9C0K7 418 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 EPB41L5Q9HCM4 733 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 NFKBIL1Q9UBC1 381 aaPredicted RBP21.05■□□□□ 0.96
HMGB3-205ENST00000455596 TRHDEQ9UKU6 1024 aa21.05■□□□□ 0.96
HMGB3-205ENST00000455596 ATXN7L1Q9ULK2 861 aaPredicted RBP21.05■□□□□ 0.96
HMGB3-205ENST00000455596 LOC285095A0A1B0GVY8 99 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 CCKBRP32239 447 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 PTPN7P35236 360 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 WNT3AP56704 352 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 CCDC173Q0VFZ6 552 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 ZNF569Q5MCW4 686 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 ZNF438Q7Z4V0 828 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 PDZD3Q86UT5 571 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 TRAM1L1Q8N609 369 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 PATE1Q8WXA2 126 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 PRR11Q96HE9 360 aaPredicted RBP21.04■□□□□ 0.96
HMGB3-205ENST00000455596 FERMT1Q9BQL6 677 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 OSBPL8Q9BZF1 889 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 FOXP3Q9BZS1 431 aa21.04■□□□□ 0.96
HMGB3-205ENST00000455596 ZNF106Q9H2Y7 1883 aaKnown RBP21.04■□□□□ 0.96
HMGB3-205ENST00000455596 GRID2IPA4D2P6 1211 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 SLC25A14O95258 325 aaPredicted RBP21.03■□□□□ 0.96
HMGB3-205ENST00000455596 EPOP01588 193 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 RBL1P28749 1068 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 MLLT3P42568 568 aaPredicted RBP21.03■□□□□ 0.96
HMGB3-205ENST00000455596 B4GALNT1Q00973 533 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 OTUD4Q01804 1114 aaKnown RBP21.03■□□□□ 0.96
HMGB3-205ENST00000455596 EIF3IQ13347 325 aaKnown RBP21.03■□□□□ 0.96
HMGB3-205ENST00000455596 MPP3Q13368 585 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 NR1D2Q14995 579 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 PDPK2PQ6A1A2 396 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 CHST15Q7LFX5 561 aaPredicted RBP21.03■□□□□ 0.96
HMGB3-205ENST00000455596 LRRC57Q8N9N7 239 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 SPC24Q8NBT2 197 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 ACTL9Q8TC94 416 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 MRGPRX2Q96LB1 330 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 HERPUD2Q9BSE4 406 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 CARD9Q9H257 536 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 RSPH14Q9UHP6 348 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 SPO11Q9Y5K1 396 aa21.03■□□□□ 0.96
HMGB3-205ENST00000455596 CFAP47Q6ZTR5 3102 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 MACROD2A1Z1Q3 448 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 F5H423 210 aaPredicted RBP21.02■□□□□ 0.96
HMGB3-205ENST00000455596 AURKAO14965 403 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 BPIP17213 487 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 ALDH4A1P30038 563 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 KIF5AQ12840 1032 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 MAP9Q49MG5 647 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 SIRPB2Q5JXA9 342 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 RAB11FIP2Q7L804 512 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 IPMKQ8NFU5 416 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 OXNAD1Q96HP4 312 aaPredicted RBP21.02■□□□□ 0.96
HMGB3-205ENST00000455596 TRABDQ9H4I3 376 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 TRIM39Q9HCM9 518 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 ATXN10Q9UBB4 475 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 AMFRQ9UKV5 643 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 PRKAB1Q9Y478 270 aa21.02■□□□□ 0.96
HMGB3-205ENST00000455596 PCYT1BQ9Y5K3 369 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms