RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 AURKAIP1Q9NWT8 199 aaPredicted RBP7.9□□□□□ -1.14
SMARCE1-206ENST00000447024 LCMT1Q9UIC8 334 aa7.9□□□□□ -1.14
SMARCE1-206ENST00000447024 VPS28Q9UK41 221 aa7.9□□□□□ -1.14
SMARCE1-206ENST00000447024 CDC42EP3Q9UKI2 254 aa7.9□□□□□ -1.14
SMARCE1-206ENST00000447024 LUC7L2Q9Y383 392 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-206ENST00000447024 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-206ENST00000447024 ATP23Q9Y6H3 246 aa7.9□□□□□ -1.14
SMARCE1-206ENST00000447024 NUMA1Q14980 2115 aa7.9□□□□□ -1.15
SMARCE1-206ENST00000447024 CHD5Q8TDI0 1954 aa7.9□□□□□ -1.15
SMARCE1-206ENST00000447024 DCHS1Q96JQ0 3298 aa7.9□□□□□ -1.15
SMARCE1-206ENST00000447024 TNRC6BQ9UPQ9 1833 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 A0A1B0GTW7 788 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 LRRC72A6NJI9 287 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 I6L893 689 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 MCF2LO15068 1137 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 RNF8O76064 485 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 FTLP02792 175 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 AMY2AP04746 511 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 PLEKP08567 350 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 TPM1P09493 284 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 HLA-EP13747 358 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 GOT1P17174 413 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 AMY2BP19961 511 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 MAKP20794 623 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 DNAJA1P31689 397 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 PTGER3P43115 390 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 YBEYP58557 167 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 GFPT1Q06210 699 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 SLC14A1Q13336 389 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 MAMLD1Q13495 774 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 HNRNPDQ14103 355 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 SF3A2Q15428 464 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 CST6Q15828 149 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 ALFQ53S48 1182 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 C2CD6Q53TS8 623 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 STPG1Q5TH74 334 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 IL27RAQ6UWB1 636 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 ZNF571Q7Z3V5 609 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 C14orf80Q86SX3 495 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 GPR135Q8IZ08 494 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 SH2D3CQ8N5H7 860 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 EMC1Q8N766 993 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 JOSD2Q8TAC2 188 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 FAM172AQ8WUF8 416 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 CASKIN2Q8WXE0 1202 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 OR8D1Q8WZ84 308 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 PTPRN2Q92932 1015 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 FAM131CQ96AQ9 280 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 SKA1Q96BD8 255 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 TBC1D31Q96DN5 1066 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 PABPC3Q9H361 631 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 TSPY26PQ9H489 355 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 TMEM9BQ9NQ34 198 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 ZNF212Q9UDV6 495 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 SLCO3A1Q9UIG8 710 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 HPCAL4Q9UM19 191 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 NCOR2Q9Y618 2525 aa7.89□□□□□ -1.15
SMARCE1-206ENST00000447024 LNP1A1A4G5 178 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 TMEM191CA6NGB0 347 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 MEI4A8MW99 385 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 TTC34A8MYJ7 566 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 WNT9AO14904 365 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 DFNA5O60443 496 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 SRGAP2O75044 1071 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 CNTN5O94779 1100 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 SEMA4FO95754 770 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 RRM1P23921 792 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 SLC8A1P32418 973 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 PCK1P35558 622 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 RECQLP46063 649 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 CCR5P51681 352 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 ATXN1P54253 815 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 IRX4P78413 519 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 GNA12Q03113 381 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 DLG2Q15700 870 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 CDO1Q16878 200 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 C15orf59Q2T9L4 293 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 TDRD12Q587J7 1177 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 TRIM61Q5EBN2 209 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 SPECC1LQ69YQ0 1117 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 NEK5Q6P3R8 708 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 NLRP14Q86W24 1093 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 PTRH1Q86Y79 214 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 SLC41A1Q8IVJ1 513 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 PCDH20Q8N6Y1 951 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 TMIEQ8NEW7 156 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 OR2T34Q8NGX1 318 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 LRIG1Q96JA1 1093 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 RPL10LQ96L21 214 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 MCEEQ96PE7 176 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 OMDQ99983 421 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 EDEM2Q9BV94 578 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 GPR174Q9BXC1 333 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 ACE2Q9BYF1 805 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 OR10A2Q9H208 303 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 NELFAQ9H3P2 528 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 CATSPERBQ9H7T0 1116 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 ANLNQ9NQW6 1124 aa7.88□□□□□ -1.15
SMARCE1-206ENST00000447024 ZNHIT6Q9NWK9 470 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms