RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 NAT6Q93015 286 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 BPIFA1Q9NP55 256 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 HACD3Q9P035 362 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 AAR2Q9Y312 384 aaKnown RBP23.47■■□□□ 1.35
VARS-217ENST00000440048 ZFC3H1O60293 1989 aaKnown RBP23.47■■□□□ 1.35
VARS-217ENST00000440048 APC2O95996 2303 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 ATP1A1P05023 1023 aaKnown RBP23.46■■□□□ 1.35
VARS-217ENST00000440048 ADRA1AP35348 466 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 HMGCLP35914 325 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 ILF3Q12906 894 aaKnown RBP eCLIP23.46■■□□□ 1.35
VARS-217ENST00000440048 TARDBPQ13148 414 aaKnown RBP eCLIP23.46■■□□□ 1.355e-8■■■■■ 29.8
VARS-217ENST00000440048 OGFOD3Q6PK18 319 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 TRAM1L1Q8N609 369 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 GPR156Q8NFN8 814 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 MAPK15Q8TD08 544 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 BLOC1S5Q8TDH9 187 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 ATG4AQ8WYN0 398 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 TMEM121Q9BTD3 319 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 ZSCAN5AQ9BUG6 496 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 GSDMCQ9BYG8 508 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 ABCG4Q9H172 646 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 CARD9Q9H257 536 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 CLCA2Q9UQC9 943 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 GPSM3Q9Y4H4 160 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 ST14Q9Y5Y6 855 aa23.46■■□□□ 1.35
VARS-217ENST00000440048 KRT37O76014 449 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 MT-CO3P00414 261 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 AK4P27144 223 aaPredicted RBP23.45■■□□□ 1.34
VARS-217ENST00000440048 GDF10P55107 478 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 CTBSQ01459 385 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 OLIG2Q13516 323 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 PYCR3Q53H96 274 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 ZNF569Q5MCW4 686 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 CDCP2Q5VXM1 449 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 RANBP10Q6VN20 620 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 SFTPA2Q8IWL1 248 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 CACTIN-AS1Q8N1I8 211 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 DCBLD1Q8N8Z6 715 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 TRIM58Q8NG06 486 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 PPP1R2P1Q96PQ5 205 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 OR2M4Q96R27 311 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 APOL2Q9BQE5 337 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 DPEP2Q9H4A9 486 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 SPATS2LQ9NUQ6 558 aaKnown RBP23.45■■□□□ 1.34
VARS-217ENST00000440048 VPS18Q9P253 973 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 PLEKHM1Q9Y4G2 1056 aa23.45■■□□□ 1.34
VARS-217ENST00000440048 TRABD2BA6NFA1 517 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 B4DGG1 531 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 NOBOXO60393 691 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 DNAJC6O75061 913 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 PDPK2PQ6A1A2 396 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 ARHGEF18Q6ZSZ5 1173 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 GLT6D1Q7Z4J2 308 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 GALNT13Q8IUC8 556 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 KLHDC8BQ8IXV7 354 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 PLEKHG4BQ96PX9 1271 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 IL17CQ9P0M4 197 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 TAAR2Q9P1P5 351 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 PCYT1BQ9Y5K3 369 aaPredicted RBP23.44■■□□□ 1.34
VARS-217ENST00000440048 CFAP47Q6ZTR5 3102 aa23.44■■□□□ 1.34
VARS-217ENST00000440048 BPTFQ12830 3046 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 COL27A1Q8IZC6 1860 aaPredicted RBP23.43■■□□□ 1.34
VARS-217ENST00000440048 LIASO43766 372 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 CAPNS1P04632 268 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 PARP6Q2NL67 630 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 SLC30A9Q6PML9 568 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 PDCD7Q8N8D1 485 aaKnown RBP23.43■■□□□ 1.34
VARS-217ENST00000440048 GLYATL1Q969I3 302 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 CCDC74AQ96AQ1 378 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 CCDC3Q9BQI4 270 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 TLR10Q9BXR5 811 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 FRMD8P1Q9BZ68 369 aaPredicted RBP23.43■■□□□ 1.34
VARS-217ENST00000440048 ARFGAP3Q9NP61 516 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 ZNHIT2Q9UHR6 403 aa23.43■■□□□ 1.34
VARS-217ENST00000440048 BUD23O43709 281 aaKnown RBP23.42■■□□□ 1.34
VARS-217ENST00000440048 SLC25A14O95258 325 aaPredicted RBP23.42■■□□□ 1.34
VARS-217ENST00000440048 METTL18O95568 372 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 SPARCL1Q14515 664 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 OASLQ15646 514 aaKnown RBP23.42■■□□□ 1.34
VARS-217ENST00000440048 C14orf28Q4W4Y0 310 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 ZNF648Q5T619 568 aaPredicted RBP23.42■■□□□ 1.34
VARS-217ENST00000440048 ZDHHC1Q8WTX9 485 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 C1orf54Q8WWF1 131 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 TBL1YQ9BQ87 522 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 RMI1Q9H9A7 625 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 ATXN10Q9UBB4 475 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 RABGEF1Q9UJ41 708 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 PRKAB1Q9Y478 270 aa23.42■■□□□ 1.34
VARS-217ENST00000440048 CASC3O15234 703 aaKnown RBP23.41■■□□□ 1.34
VARS-217ENST00000440048 USP12O75317 370 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 ACTR1BP42025 376 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 ACTR1AP61163 376 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 HLTFQ14527 1009 aaKnown RBP eCLIP23.41■■□□□ 1.34
VARS-217ENST00000440048 ZDHHC20Q5W0Z9 365 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 DENND5AQ6IQ26 1287 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 OR6C4Q8NGE1 309 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 RTP4Q96DX8 246 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 OR2AG1Q9H205 316 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 CCDC86Q9H6F5 360 aaKnown RBP23.41■■□□□ 1.34
VARS-217ENST00000440048 TRIM39Q9HCM9 518 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms