RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 UBASH3AP57075 661 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 RPS13P62277 151 aaKnown RBP5.74□□□□□ -1.49
C9orf3-205ENST00000427193 CFHR3Q02985 330 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 CFHR1Q03591 330 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 DSC1Q08554 894 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 HSP90AA4PQ58FG1 418 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 CLLU1OSQ5K130 101 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 CACHD1Q5VU97 1274 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 ZDHHC24Q6UX98 284 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 CD300LGQ6UXG3 332 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 ECHDC2Q86YB7 292 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 WDR49Q8IV35 697 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 CD302Q8IX05 232 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 OR5B17Q8NGF7 314 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 OLIG1Q8TAK6 271 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 JPH3Q8WXH2 748 aaPredicted RBP5.74□□□□□ -1.49
C9orf3-205ENST00000427193 RSPH1Q8WYR4 309 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 SEMA4DQ92854 862 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 MARK4Q96L34 752 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 HS6ST2Q96MM7 605 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 PHF7Q9BWX1 381 aaPredicted RBP5.74□□□□□ -1.49
C9orf3-205ENST00000427193 TMEM8AQ9HCN3 771 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 PLCB1Q9NQ66 1216 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 C1orf112Q9NSG2 853 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 POT1Q9NUX5 634 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 TMEM161AQ9NX61 479 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 TAB2Q9NYJ8 693 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 RBAKQ9NYW8 714 aaPredicted RBP5.74□□□□□ -1.49
C9orf3-205ENST00000427193 IFNKQ9P0W0 207 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 ZNF180Q9UJW8 692 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 HES2Q9Y543 173 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 NLRC5Q86WI3 1866 aa5.74□□□□□ -1.49
C9orf3-205ENST00000427193 LOC102723971A0A1B0GUV8 181 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ARL5CA6NH57 179 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 CD8B2A6NJW9 211 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 GOLGA6L19H0YKK7 550 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 PIRO00625 290 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 RGS10O43665 173 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 RASAL1O95294 804 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ADCY5O95622 1261 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ASS1P00966 412 aaKnown RBP5.73□□□□□ -1.49
C9orf3-205ENST00000427193 AFPP02771 609 aaKnown RBP5.73□□□□□ -1.49
C9orf3-205ENST00000427193 TRIM49P0CI25 452 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 TRIM49CP0CI26 452 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 PON1P27169 355 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 SLC7A1P30825 629 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 HNRNPH3P31942 346 aaKnown RBP5.73□□□□□ -1.49
C9orf3-205ENST00000427193 GCLMP48507 274 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 CLCN5P51795 746 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 NCBP1Q09161 790 aaKnown RBP5.73□□□□□ -1.49
C9orf3-205ENST00000427193 SEC23BQ15437 767 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 KRT39Q6A163 491 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 NPNTQ6UXI9 565 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ANKRD13BQ86YJ7 626 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 UBALD2Q8IYN6 164 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 THNSL1Q8IYQ7 743 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 OR56A3Q8NH54 315 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 TAS1R2Q8TE23 839 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 SEPT8Q92599 483 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ZNF689Q96CS4 500 aaPredicted RBP5.73□□□□□ -1.49
C9orf3-205ENST00000427193 BICD1Q96G01 975 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 RPGRIP1Q96KN7 1286 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 LRGUKQ96M69 825 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 SCLT1Q96NL6 688 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ADPGKQ9BRR6 497 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 SYT11Q9BT88 431 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 TCHPQ9BT92 498 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 EDEM3Q9BZQ6 932 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 GPR88Q9GZN0 384 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 GANQ9H2C0 597 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 APOBEC3GQ9HC16 384 aaKnown RBP5.73□□□□□ -1.49
C9orf3-205ENST00000427193 TMEM184CQ9NVA4 438 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 MIOSQ9NXC5 875 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 CNTN6Q9UQ52 1028 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 ATG2AQ2TAZ0 1938 aa5.73□□□□□ -1.49
C9orf3-205ENST00000427193 FANCMQ8IYD8 2048 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 SMG1Q96Q15 3661 aaKnown RBP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 C5orf67F2Z3F1 127 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 TMEM189-UBE2V1I3L0A0 370 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 STX10O60499 249 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 ZC3H11AO75152 810 aaKnown RBP eCLIP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 TUSC2O75896 110 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 GYPCP04921 128 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 RB1P06400 928 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 CTSAP10619 480 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 MTIF2P46199 727 aaKnown RBP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 KLK7P49862 253 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 MXI1P50539 228 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 TPM4P67936 248 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 GCNT1Q02742 428 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 ANGPT1Q15389 498 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 SYCP1Q15431 976 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 EXOC3L4Q17RC7 722 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 CCDC40Q4G0X9 1142 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 KLHDC7AQ5VTJ3 777 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 SPECC1LQ69YQ0 1117 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 TWF2Q6IBS0 349 aaKnown RBP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 JADE1Q6IE81 842 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 TRIM65Q6PJ69 517 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms