RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MARCH2Q9P0N8 246 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 EIF2B4Q9UI10 523 aaKnown RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 PCDHGA7Q9Y5G6 932 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 BPTFQ12830 3046 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 AZIN1O14977 448 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 MATN3O15232 486 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 CAPN15O75808 1086 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 CYP11A1P05108 521 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 RBP1P09455 135 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 SCNN1AP37088 669 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 GATMP50440 423 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 UFM1P61960 85 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 FRG1Q14331 258 aaKnown RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 MAPK11Q15759 364 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 HS3ST5Q8IZT8 346 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 CLDN19Q8N6F1 224 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 SIDT2Q8NBJ9 832 aaKnown RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 METTL6Q8TCB7 284 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 CCDC97Q96F63 343 aaPredicted RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 OR4F21O95013 312 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 CHEK2O96017 543 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 FASP25445 335 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 DSC1Q08554 894 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 DUSP4Q13115 394 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 TUSC3Q13454 348 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 MAPRE2Q15555 327 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 AP5B1Q2VPB7 878 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 SAMD4BQ5PRF9 694 aaKnown RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 GABPB2Q8TAK5 448 aaPredicted RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 IGSF8Q969P0 613 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 NAA50Q9GZZ1 169 aaKnown RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 CCSER2Q9H7U1 834 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 MKS1Q9NXB0 559 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 RCOR3Q9P2K3 495 aaPredicted RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 CDH9Q9ULB4 789 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 MYO10Q9HD67 2058 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 A0A1W2PPW3 197 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 IRAK2O43187 625 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 GKP32189 559 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 PRKCQQ04759 706 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 INPP5AQ14642 412 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 GLT6D1Q7Z4J2 308 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 FAM81AQ8TBF8 368 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 HPS4Q9NQG7 708 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 OSER1Q9NX31 292 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 DNAJB4Q9UDY4 337 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 DNAJC15Q9Y5T4 150 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 CDH23Q9H251 3354 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 BCAS2O75934 225 aaPredicted RBP13.31□□□□□ -0.28
USP42-203ENST00000426246 SLC2A4P14672 509 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 DNAJB2P25686 324 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 BNIP3Q12983 259 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 ZFP1Q6P2D0 407 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 SLC2A7Q6PXP3 512 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 TMEM207Q6UWW9 146 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 TMEM26Q6ZUK4 368 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 SLC24A5Q71RS6 500 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 DENND1CQ8IV53 801 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 CATSPER1Q8NEC5 780 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 RIN3Q8TB24 985 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 CALML6Q8TD86 181 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 KCTD13Q8WZ19 329 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 TSPAN17Q96FV3 270 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 KIFC1Q9BW19 673 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 INTS7Q9NVH2 962 aaKnown RBP13.31□□□□□ -0.28
USP42-203ENST00000426246 RIMS3Q9UJD0 308 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 ANKRD6Q9Y2G4 727 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 KRT87PA6NCN2 255 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 HHLA1C9JL84 531 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 SLCO1B7G3V0H7 640 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 VILLO15195 856 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 SNAP29O95721 258 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 EOMESO95936 686 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 ALDOCP09972 364 aaKnown RBP13.31□□□□□ -0.28
USP42-203ENST00000426246 PABPC4LP0CB38 370 aaKnown RBP13.31□□□□□ -0.28
USP42-203ENST00000426246 CAPN3P20807 821 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 ADSLP30566 484 aaPredicted RBP13.31□□□□□ -0.28
USP42-203ENST00000426246 SLC5A2P31639 672 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 NAB1Q13506 487 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 OR4D1Q15615 310 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 MRNIPQ6NTE8 343 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 UGT3A1Q6NUS8 523 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 FBXL22Q6P050 247 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 FAM171BQ6P995 826 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 LRRC8DQ7L1W4 858 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 GALNT5Q7Z7M9 940 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 SNX29P2Q8IUI4 249 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 ARHGAP12Q8IWW6 846 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 PSD4Q8NDX1 1056 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 ST13P5Q8NFI4 369 aaPredicted RBP13.31□□□□□ -0.28
USP42-203ENST00000426246 VAT1Q99536 393 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 C1QTNF1Q9BXJ1 281 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 ABCC13Q9NSE7 274 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 NSMCE4AQ9NXX6 385 aa13.31□□□□□ -0.28
USP42-203ENST00000426246 RSL24D1Q9UHA3 163 aaKnown RBP13.31□□□□□ -0.28
USP42-203ENST00000426246 OGDHLQ9ULD0 1010 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms