RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 FRMD8Q9BZ67 464 aaPredicted RBP15.64■□□□□ 0.09
BRAT1-202ENST00000421712 EIF2B3Q9NR50 452 aaKnown RBP15.64■□□□□ 0.09
BRAT1-202ENST00000421712 NFKBIL1Q9UBC1 381 aaPredicted RBP15.64■□□□□ 0.09
BRAT1-202ENST00000421712 FTSJ1Q9UET6 329 aa15.64■□□□□ 0.09
BRAT1-202ENST00000421712 ASIC3Q9UHC3 531 aa15.64■□□□□ 0.09
BRAT1-202ENST00000421712 ZNHIT2Q9UHR6 403 aa15.64■□□□□ 0.09
BRAT1-202ENST00000421712 CNOT6Q9ULM6 557 aaKnown RBP15.64■□□□□ 0.09
BRAT1-202ENST00000421712 SUFUQ9UMX1 484 aa15.64■□□□□ 0.09
BRAT1-202ENST00000421712 GPSM3Q9Y4H4 160 aa15.64■□□□□ 0.09
BRAT1-202ENST00000421712 DGKBQ9Y6T7 804 aa15.64■□□□□ 0.09
BRAT1-202ENST00000421712 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 PCNX2A6NKB5 2137 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 CCDC188H7C350 402 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A9O60656 530 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A6P19224 532 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A1P22309 533 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A4P22310 534 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A3P35503 534 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A5P35504 534 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 ADCY8P40145 1251 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 HADHAP40939 763 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 SESN2P58004 480 aaPredicted RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 MSLNQ13421 630 aaPredicted RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 LAMB3Q13751 1172 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 ITGA9Q13797 1035 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 DEFB133Q30KQ1 61 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 ATP13A5Q4VNC0 1218 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 CCDC38Q502W7 563 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 CCDC157Q569K6 752 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 ZNF648Q5T619 568 aaPredicted RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 KCTD16Q68DU8 428 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 PDPK2PQ6A1A2 396 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 KANSL1Q7Z3B3 1105 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 TAF8Q7Z7C8 310 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 PHYKPLQ8IUZ5 450 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 FSTL5Q8N475 847 aaPredicted RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 OR13C4Q8NGS5 318 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 SCG3Q8WXD2 468 aaKnown RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 GLYATL1Q969I3 302 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 COX14Q96I36 57 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 DNAJC1Q96KC8 554 aaKnown RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 CNDP2Q96KP4 475 aaKnown RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 LRRC61Q9BV99 259 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 TMEM168Q9H0V1 697 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A7Q9HAW7 530 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A10Q9HAW8 530 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 UGT1A8Q9HAW9 530 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 CASS4Q9NQ75 786 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 FKBPLQ9UIM3 349 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 APPL1Q9UKG1 709 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 SLC17A4Q9Y2C5 497 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 OAS3Q9Y6K5 1087 aaKnown RBP15.63■□□□□ 0.09
BRAT1-202ENST00000421712 CSNK1G3Q9Y6M4 447 aa15.63■□□□□ 0.09
BRAT1-202ENST00000421712 DNAH14Q0VDD8 3507 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 SPAARA0A1B0GVQ0 90 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 AP3B1O00203 1094 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 CCL22O00626 93 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 LDB2O43679 373 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 SIGLEC6O43699 453 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 URI1O94763 535 aaPredicted RBP15.62■□□□□ 0.09
BRAT1-202ENST00000421712 IVLP07476 585 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 TPSB2P20231 275 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 ZNF140P52738 457 aaPredicted RBP15.62■□□□□ 0.09
BRAT1-202ENST00000421712 SIM1P81133 766 aaPredicted RBP15.62■□□□□ 0.09
BRAT1-202ENST00000421712 CDK16Q00536 496 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 TPSAB1Q15661 275 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 SKIDA1Q1XH10 827 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 GKN2Q86XP6 184 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 GALNT13Q8IUC8 556 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 ZNF398Q8TD17 642 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 STYXQ8WUJ0 223 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 TBATAQ96M53 351 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 TTC25Q96NG3 672 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 DUSP23Q9BVJ7 150 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 CLPBQ9H078 707 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 OR2AG1Q9H205 316 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 ASB8Q9H765 288 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 TRIM39Q9HCM9 518 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 NLGN3Q9NZ94 848 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 BFARQ9NZS9 450 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 PCYOX1Q9UHG3 505 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 SLC30A1Q9Y6M5 507 aa15.62■□□□□ 0.09
BRAT1-202ENST00000421712 TCRBV7S3A2A0A539 114 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 HEATR9A2RTY3 570 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 LMO7DNF2Z398 122 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 TRIM38O00635 465 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 YY2O15391 372 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 CBFA2T3O75081 653 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 MTX2O75431 263 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 SRP72O76094 671 aaKnown RBP15.61■□□□□ 0.09
BRAT1-202ENST00000421712 PRAMEF1O95521 474 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 FUCA1P04066 466 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 CELA2BP08218 269 aaPredicted RBP15.61■□□□□ 0.09
BRAT1-202ENST00000421712 ADRA1DP25100 572 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 DAB2P98082 770 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 DR1Q01658 176 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 GTF2H3Q13889 308 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 LRRC8BQ6P9F7 803 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 PPHLN1Q8NEY8 458 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms