RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 TTLL3Q9Y4R7 772 aa8.03□□□□□ -1.12
VIM-202ENST00000421459 A0A1W2PQ67 120 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 A6NCN8 305 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 MTSS1O43312 755 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 MFSD11O43934 449 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 DLGAP3O95886 979 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 CCDC172P0C7W6 258 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 TYRP1P17643 537 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 MAP4P27816 1152 aaKnown RBP8.02□□□□□ -1.13
VIM-202ENST00000421459 PCK1P35558 622 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 GJC1P36383 396 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 HSPA9P38646 679 aaKnown RBP8.02□□□□□ -1.13
VIM-202ENST00000421459 CASRP41180 1078 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 SEPHS1P49903 392 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 EPHB1P54762 984 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 MLLT10P55197 1068 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 GPLD1P80108 840 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 SLC25A11Q02978 314 aaKnown RBP8.02□□□□□ -1.13
VIM-202ENST00000421459 PLA2G4EQ3MJ16 856 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 WDR74Q6RFH5 385 aaPredicted RBP8.02□□□□□ -1.13
VIM-202ENST00000421459 PSTKQ8IV42 348 aaKnown RBP8.02□□□□□ -1.13
VIM-202ENST00000421459 LPCAT1Q8NF37 534 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 ANKRD20A12PQ8NF67 263 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 EXD1Q8NHP7 514 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 ARRDC2Q8TBH0 407 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 NSMCE1Q8WV22 266 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 STARD8Q92502 1023 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 EID2BQ96D98 161 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 NAP1L5Q96NT1 182 aaPredicted RBP8.02□□□□□ -1.13
VIM-202ENST00000421459 BRD8Q9H0E9 1235 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 THAP2Q9H0W7 228 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 RTN4Q9NQC3 1192 aaKnown RBP8.02□□□□□ -1.13
VIM-202ENST00000421459 FBXO8Q9NRD0 319 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 ANO10Q9NW15 660 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 RBM22Q9NW64 420 aaKnown RBP eCLIP8.02□□□□□ -1.13
VIM-202ENST00000421459 KCTD5Q9NXV2 234 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 SLC23A2Q9UGH3 650 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 TP53TG5Q9Y2B4 290 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 MAN2B2Q9Y2E5 1009 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 SLC30A1Q9Y6M5 507 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 UNC13CQ8NB66 2214 aa8.02□□□□□ -1.13
VIM-202ENST00000421459 AHCTF1Q8WYP5 2266 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 CLEC18AA5D8T8 446 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 PRR19A6NJB7 356 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 POLR1CO15160 346 aaPredicted RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 KIF1CO43896 1103 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 PDGFAP04085 211 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 HLA-DQB2P05538 268 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 PIRTP0C851 137 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 GZMAP12544 262 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 ZNF8P17098 575 aaPredicted RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 TCN2P20062 427 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 STAT5AP42229 794 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 SSR1P43307 286 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 LEPRP48357 1165 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 SPINT3P49223 89 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 ARSEP51690 589 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 CDH6P55285 790 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 RAB15P59190 212 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 FOXM1Q08050 763 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 KLHL30Q0D2K2 578 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 ABHD18Q0P651 414 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 SLC10A2Q12908 348 aaPredicted RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 ERV3-1Q14264 604 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 KRT81Q14533 505 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 SEPT7Q16181 437 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 STX1AQ16623 288 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 BOLA3Q53S33 107 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 ALS2CLQ60I27 953 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 NCBP2-AS2Q69YL0 99 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 CRTC3Q6UUV7 619 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 CLEC18BQ6UXF7 455 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 CEACAM20Q6UY09 585 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 B4GALNT4Q76KP1 1039 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 ZNF765Q7L2R6 523 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 BBS5Q8N3I7 341 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 CLEC18CQ8NCF0 446 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 GALNT6Q8NCL4 622 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 APOBEC4Q8WW27 367 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 KIAA1143Q96AT1 154 aaPredicted RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 CATSPER2Q96P56 530 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 TGM7Q96PF1 710 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 PLEKHG4BQ96PX9 1271 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 RUFY1Q96T51 708 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 DPYSL5Q9BPU6 564 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 TDRD1Q9BXT4 1180 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 POLR1EQ9GZS1 481 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 ISCUQ9H1K1 167 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 OR2AG1Q9H205 316 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 AKIRIN1Q9H9L7 192 aaPredicted RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 PCDH9Q9HC56 1237 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 SARS2Q9NP81 518 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 KLC4Q9NSK0 619 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 SIDT1Q9NXL6 827 aaKnown RBP8.01□□□□□ -1.13
VIM-202ENST00000421459 AIPL1Q9NZN9 384 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 ATXN10Q9UBB4 475 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 CPNE7Q9UBL6 633 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 TRIM10Q9UDY6 481 aa8.01□□□□□ -1.13
VIM-202ENST00000421459 TUBD1Q9UJT1 453 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms