RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 NR1D2Q14995 579 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 TMPRSS9Q7Z410 1059 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 ZNF438Q7Z4V0 828 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 PDZD3Q86UT5 571 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 LRRC57Q8N9N7 239 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 HTR3CQ8WXA8 447 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 OXNAD1Q96HP4 312 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-203ENST00000400772 CALR3Q96L12 384 aaKnown RBP15.73■□□□□ 0.11
ATG4B-203ENST00000400772 MRGPRX2Q96LB1 330 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 FCRL5Q96RD9 977 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 FOXP3Q9BZS1 431 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 CDH19Q9H159 772 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 VPS18Q9P253 973 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 FAM153AQ9UHL3 310 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 PRKAB1Q9Y478 270 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 CDRT15L2A8MXV6 281 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 HACD1B0YJ81 288 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 F5H423 210 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 APOC4-APOC2K7ER74 178 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 PPM1DO15297 605 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 RRP8O43159 456 aaKnown RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 MTSS1O43312 755 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ASMTLO95671 621 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 EML2O95834 649 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 APOC2P02655 101 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 BPIP17213 487 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ABCG1P45844 678 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 NAP1L1P55209 391 aaKnown RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 WNT3AP56704 352 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 OR1D5P58170 312 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ZFP36L1Q07352 338 aaKnown RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 CCDC173Q0VFZ6 552 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 XRCC4Q13426 336 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 NOMO1Q15155 1222 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ZNF648Q5T619 568 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ALS2CLQ60I27 953 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 AADACL2Q6P093 401 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 PID1Q7Z2X4 250 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 GALNT13Q8IUC8 556 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 WDR36Q8NI36 951 aaKnown RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ALG3Q92685 438 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 LIN37Q96GY3 246 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 VAT1Q99536 393 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 GORASP1Q9BQQ3 440 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 SPATA16Q9BXB7 569 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ARFGAP3Q9NP61 516 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 KLHL8Q9P2G9 620 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 NFKBIL1Q9UBC1 381 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-203ENST00000400772 ZNHIT2Q9UHR6 403 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 EFR3BQ9Y2G0 817 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 FAM208BQ5VWN6 2430 aa15.72■□□□□ 0.11
ATG4B-203ENST00000400772 CCDC187A0A096LP49 1063 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 NUAK1O60285 661 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 IPO7O95373 1038 aaKnown RBP15.71■□□□□ 0.11
ATG4B-203ENST00000400772 EPOP01588 193 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 PYGMP11217 842 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 RBL1P28749 1068 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 CCKBRP32239 447 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 PTPN7P35236 360 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 INHBCP55103 352 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 DCDC1P59894 354 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 LRP8Q14114 963 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 FOXR1Q6PIV2 292 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 LRRC69Q6ZNQ3 347 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 SPACA3Q8IXA5 215 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 TRAM1L1Q8N609 369 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 ACTL9Q8TC94 416 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 NAF1Q96HR8 494 aaKnown RBP15.71■□□□□ 0.11
ATG4B-203ENST00000400772 OSBPL8Q9BZF1 889 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 GPR63Q9BZJ6 419 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 ATXN10Q9UBB4 475 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 TRIM10Q9UDY6 481 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 TMPRSS11EQ9UL52 423 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 ADGRG1Q9Y653 693 aa15.71■□□□□ 0.11
ATG4B-203ENST00000400772 TRBV23OR9-2A0A075B6M9 112 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 CCDC66A2RUB6 948 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 RHPN2P1A8MT19 583 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 TMX2-CTNND1H3BSU7 103 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 H7C0C1 242 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 SLC4A1P02730 911 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 ZNF8P17098 575 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-203ENST00000400772 RBMS1P29558 406 aaKnown RBP15.7■□□□□ 0.1
ATG4B-203ENST00000400772 CDC25BP30305 580 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 CHRNA4P43681 627 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 ATP5OP48047 213 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 RWDD2BP57060 319 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 PCBP4P57723 403 aaKnown RBP15.7■□□□□ 0.1
ATG4B-203ENST00000400772 OTUD4Q01804 1114 aaKnown RBP15.7■□□□□ 0.1
ATG4B-203ENST00000400772 TLE3Q04726 772 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 PEX6Q13608 980 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 SIRPB2Q5JXA9 342 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 CCDC70Q6NSX1 233 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 ZNF574Q6ZN55 896 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-203ENST00000400772 CHST15Q7LFX5 561 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-203ENST00000400772 SLITRK4Q8IW52 837 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 SLC25A41Q8N5S1 370 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 SPC24Q8NBT2 197 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 ZNF248Q8NDW4 579 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 TMEM74Q96NL1 305 aa15.7■□□□□ 0.1
ATG4B-203ENST00000400772 FAM118BQ9BPY3 351 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms