RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 C1orf232A0A0U1RR37 186 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 PRORSD1PA6NEY8 169 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 GSTA4O15217 222 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 IL10P22301 178 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 YBEYP58557 167 aaPredicted RBP10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 GPR17Q13304 367 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 MANEALQ5VSG8 457 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 PGM2L1Q6PCE3 622 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 MFN1Q8IWA4 741 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 TMEM151AQ8N4L1 468 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 PDZD8Q8NEN9 1154 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 CANT1Q8WVQ1 401 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 C1orf74Q96LT6 269 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 PPM1MQ96MI6 270 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 TBCDQ9BTW9 1192 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 SMG9Q9H0W8 520 aaKnown RBP10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 WWOXQ9NZC7 414 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 LZTS1Q9Y250 596 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 DNAJC15Q9Y5T4 150 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 SIP14410 1827 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 PLXNA1Q9UIW2 1896 aa10.39□□□□□ -0.75
CPSF1P1-201ENST00000397477 A6NHS1 94 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 GNGT2O14610 69 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 MMP2P08253 660 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC2A4P14672 509 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZNF37AP17032 561 aaPredicted RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 HERVK_113P63132 956 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 TRIM25Q14258 630 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 TLR1Q15399 786 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZNF423Q2M1K9 1284 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 RABL3Q5HYI8 236 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 TMEM74Q96NL1 305 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 PKMYT1Q99640 499 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ERVK-6Q9BXR3 956 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 A0A1B0GTL3 188 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 TMCC1O94876 653 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 RPLP2P05387 115 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ATXN1LP0C7T5 689 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 PKMP14618 531 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 CD1DP15813 335 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ALOX15P16050 662 aaPredicted RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 PRDX6P30041 224 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 DDX39BQ13838 428 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 SAMD4BQ5PRF9 694 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 KBTBD6Q86V97 674 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 THUMPD3Q9BV44 507 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 GSTO2Q9H4Y5 243 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 IRAK4Q9NWZ3 460 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 SRRDQ9UH36 339 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 NEU3Q9UQ49 428 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 NBNO60934 754 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 CLIC3O95833 236 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ATF6P18850 670 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 AKT1P31749 480 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 HSPA7P48741 367 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 STC1P52823 247 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 CYP4F8P98187 520 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 PPP1R8Q12972 351 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ADGRE1Q14246 886 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 USP41Q3LFD5 358 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 PIGGQ5H8A4 983 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 AFTPHQ6ULP2 937 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 HS6ST3Q8IZP7 471 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 GFM2Q969S9 779 aaKnown RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 WBP2Q969T9 261 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 NR1H4Q96RI1 486 aaPredicted RBP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC30A3Q99726 388 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 RNF208Q9H0X6 261 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 TLR9Q9NR96 1032 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 PCDHGB4Q9UN71 923 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 SH3BP1Q9Y3L3 701 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 PCDHGB5Q9Y5G0 923 aa10.38□□□□□ -0.75
CPSF1P1-201ENST00000397477 A0A1W2PQ67 120 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 CCDC154A6NI56 674 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 RPL10P27635 214 aaKnown RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 UGT3A1Q6NUS8 523 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 FBXL19Q6PCT2 694 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 MDGA1Q8NFP4 955 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 ISL2Q96A47 359 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 FEM1CQ96JP0 617 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 AARSD1Q9BTE6 412 aaKnown RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 RNF38Q9H0F5 515 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 HIPK3Q9H422 1215 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 GID8Q9NWU2 228 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 C6orf203Q9P0P8 240 aaPredicted RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 LIN7AO14910 233 aaPredicted RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 KLKB1P03952 638 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 FAM58BPP0C7Q3 252 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZNF23P17027 643 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 HOXC8P31273 242 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 HTR7P34969 479 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 APLP1P51693 650 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms