RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SMIM11AP58511 58 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 PIK3R6Q5UE93 754 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 METTL21CQ5VZV1 264 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 UTS2BQ765I0 119 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 TRMT61BQ9BVS5 477 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 C2CD2Q9Y426 696 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 SNX10Q9Y5X0 201 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ATP6AP2A0A1C7CYW4 349 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 CLEC3AO75596 197 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ATP6AP2O75787 350 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 STATHP02808 62 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 NAGLUP54802 743 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ATXN7L2Q5T6C5 722 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 PTCHD4Q6ZW05 846 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 C8orf59Q8N0T1 100 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ZNF611Q8N823 705 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 TIFAQ96CG3 184 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 GPR20Q99678 358 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 LPIN3Q9BQK8 851 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 LOC102724159A0A0B4J2E5 919 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 PRKCGP05129 697 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 GJA1P17302 382 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 STAT5AP42229 794 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ACTR3P61158 418 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 PWP2Q15269 919 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 LIN54Q6MZP7 749 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 CXorf57Q6NSI4 855 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 C1orf186Q6ZWK4 172 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 TMC8Q8IU68 726 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 SLC22A15Q8IZD6 547 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 PTCD2Q8WV60 388 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 HEPHQ9BQS7 1158 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ZDHHC4Q9NPG8 344 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 B3GALT2O43825 422 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 DUSP11O75319 330 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 RSL1D1O76021 490 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 CST1P01037 141 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 FGF1P05230 155 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 MATKP42679 507 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 CEBPGP53567 150 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 LRP8Q14114 963 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 KCTD19Q17RG1 926 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 SPESP1Q6UW49 350 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 TMPRSS9Q7Z410 1059 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 DHRSXQ8N5I4 330 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ING3Q9NXR8 418 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 CPSF4LA6NMK7 179 aaKnown RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 PEX12O00623 359 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 TNFP01375 233 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 GLI1P08151 1106 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 WNT3AP56704 352 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 SQLEQ14534 574 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 CCSAPQ6IQ19 270 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 TSHZ1Q6ZSZ6 1077 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 LDB1Q86U70 411 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 KATNAL2Q8IYT4 538 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 OR2AJ1Q8NGZ0 328 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 OVCA2Q8WZ82 227 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 Q96MT0 163 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 CARS2Q9HA77 564 aaKnown RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 H7C0S8 307 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 TMCC2O75069 709 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 ZBTB48P10074 688 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 HOXB8P17481 243 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 PTPN4P29074 926 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 SEPHS1P49903 392 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 SMCO1Q147U7 214 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 HSDL1Q3SXM5 330 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 CLVS1Q8IUQ0 354 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 MBOAT7Q96N66 472 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 RNF157Q96PX1 679 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 FAM192AQ9GZU8 254 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 NUAK2Q9H093 628 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 CDK7P50613 346 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 PER3P56645 1201 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 LARS2Q15031 903 aaKnown RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 SPANXN2Q5MJ10 180 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 ALG1LQ6GMV1 187 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 ZNF433Q8N7K0 673 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 TMEM161BQ8NDZ6 487 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 EBPLQ9BY08 206 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 C9IYK1 514 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 IL33O95760 270 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 CSTF2P33240 577 aaKnown RBP eCLIP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 GJA9P57773 515 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 IKBIPQ70UQ0 350 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 HMG20AQ9NP66 347 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 MTRRQ9UBK8 725 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 TBC1D30Q9Y2I9 924 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 SAMHD1Q9Y3Z3 626 aaKnown RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 MORC2Q9Y6X9 1032 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 PTPRUQ92729 1446 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 NRXN1Q9ULB1 1477 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 INMTO95050 263 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 DGUOKQ16854 277 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 TXNDC11Q6PKC3 985 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 MMAAQ8IVH4 418 aaKnown RBP17.36■□□□□ 0.37
MCF2L-208ENST00000397030 GLIS3Q8NEA6 775 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 PIH1D2Q8WWB5 315 aa17.36■□□□□ 0.37
MCF2L-208ENST00000397030 SLC25A36Q96CQ1 311 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms