RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ZCCHC14Q8WYQ9 949 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 PPP1R14BQ96C90 147 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 PHF21BQ96EK2 531 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 DTD2Q96FN9 168 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TWSG1Q9GZX9 223 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRN1-202ENST00000392981 VAT1LQ9HCJ6 419 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 PLK2Q9NYY3 685 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 PKD2L2Q9NZM6 624 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLC25A10Q9UBX3 287 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLCO3A1Q9UIG8 710 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CTTNBP2Q8WZ74 1663 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 AATKQ6ZMQ8 1374 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TCRBV7S3A2A0A539 114 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 BTBD17A6NE02 478 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 USP17L23D6RBM5 183 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SPRY1O43609 319 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 DLATP10515 647 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZNF3P17036 446 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CASTP20810 708 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 PTNP21246 168 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 UGT1A1P22309 533 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TM4SF1P30408 202 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MMP13P45452 471 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CLK3P49761 638 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 CLRN1P58418 232 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SHC2P98077 582 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TNFRSF17Q02223 184 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MVKQ03426 396 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ACKR1Q16570 336 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MEP1BQ16820 701 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 AMZ1Q400G9 498 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CRY2Q49AN0 593 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRN1-202ENST00000392981 PRAMEF20Q5VT98 475 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 INO80CQ6PI98 192 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 GLRX5Q86SX6 157 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 DNAJC10Q8IXB1 793 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 B3GALNT2Q8NCR0 500 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 OR4A16Q8NH70 328 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CORO2AQ92828 525 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 OTUB1Q96FW1 271 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 CATSPER2Q96P56 530 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZNF559Q9BR84 538 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZPBPQ9BS86 351 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ADAMTS10Q9H324 1103 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 LCMT1Q9UIC8 334 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 RUVBL2Q9Y230 463 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 HCFC2Q9Y5Z7 792 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MAGI3Q5TCQ9 1506 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CYP2D7A0A087X1C5 515 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 A0A0A0MRY4 1105 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 BECN2A8MW95 431 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 K7EQM0 130 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 PSMD3O43242 534 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 SEC14L5O43304 696 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 KLKB1P03952 638 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 WNT3P56703 355 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 WNT3AP56704 352 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 GSCP56915 257 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 TUBB4BP68371 445 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ACSM1Q08AH1 577 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 FAM98BQ52LJ0 330 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 CLEC2AQ6UVW9 174 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 DHRS13Q6UX07 377 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 LIPIQ6XZB0 460 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 KANSL1Q7Z3B3 1105 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 PSTKQ8IV42 348 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 NUDCD3Q8IVD9 361 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 MIB2Q96AX9 1013 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 LRIG1Q96JA1 1093 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CXorf58Q96LI9 332 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ZNF607Q96SK3 696 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ASCL2Q99929 193 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 RIOK1Q9BRS2 568 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 NTPCRQ9BSD7 190 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 GPR62Q9BZJ7 368 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TASP1Q9H6P5 420 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 PIH1D3Q9NQM4 214 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 HOXC10Q9NYD6 342 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 RDH8Q9NYR8 311 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 LARSQ9P2J5 1176 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 GPR75-ASB3A0A0A6YYF3 556 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ST8SIA5O15466 376 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TSPAN1O60635 241 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 FESP07332 822 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 FHP07954 510 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ETS2P15036 469 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ITGA3P26006 1051 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 UQCRC1P31930 480 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 DGKQP52824 942 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CHIT1Q13231 466 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 DPYSQ14117 519 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 LARS2Q15031 903 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 ASTE1Q2TB18 679 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 ZIK1Q3SY52 487 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 DNASE1L2Q92874 299 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 C16orf58Q96GQ5 468 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 KLHL32Q96NJ5 620 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 PCGF1Q9BSM1 259 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms