RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 STIP1P31948 543 aaKnown RBP12.57□□□□□ -0.4
GGPS1-203ENST00000391855 CHRNA4P43681 627 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 ST3GAL2Q16842 350 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 PARP6Q2NL67 630 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 C14orf28Q4W4Y0 310 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 PYCR3Q53H96 274 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 FAM182AQ5T1J6 154 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 ALS2CLQ60I27 953 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 TTC30BQ8N4P2 665 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 SLC25A41Q8N5S1 370 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 GPR26Q8NDV2 337 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 CCDC110Q8TBZ0 833 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 BLOC1S5Q8TDH9 187 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 RTP4Q96DX8 246 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 VPS35Q96QK1 796 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 C19orf43Q9BQ61 176 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 DPEP2Q9H4A9 486 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 CCDC86Q9H6F5 360 aaKnown RBP12.57□□□□□ -0.4
GGPS1-203ENST00000391855 C10orf88Q9H8K7 445 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 SIRPGQ9P1W8 387 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 ZKSCAN5Q9Y2L8 839 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 PKP3Q9Y446 797 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 SCN8AQ9UQD0 1980 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 B4DGG1 531 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 F5H423 210 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-203ENST00000391855 ZW10O43264 779 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 MYF5P13349 255 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 GLB1P16278 677 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 ADRA1AP35348 466 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 ACTN2P35609 894 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 SPAM1P38567 509 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 ADCY8P40145 1251 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 ACTR1BP42025 376 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 POLD2P49005 469 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 ACTR1AP61163 376 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 PDE1BQ01064 536 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 CTBSQ01459 385 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 TARDBPQ13148 414 aaKnown RBP eCLIP12.56□□□□□ -0.4
GGPS1-203ENST00000391855 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 ITGA9Q13797 1035 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 TCEA2Q15560 299 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 CERCAMQ5T4B2 595 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 RANBP10Q6VN20 620 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 TRIM74Q86UV6 250 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 FAM71DQ8N9W8 422 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 GLYATL1Q969I3 302 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 TBL1YQ9BQ87 522 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 CCDC3Q9BQI4 270 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 GORASP1Q9BQQ3 440 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 NRSN2Q9GZP1 204 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 LRRC40Q9H9A6 602 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 TRIM39Q9HCM9 518 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 IL17CQ9P0M4 197 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 TAAR2Q9P1P5 351 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 CNOT6Q9ULM6 557 aaKnown RBP12.56□□□□□ -0.4
GGPS1-203ENST00000391855 R3HDM2Q9Y2K5 976 aaKnown RBP12.56□□□□□ -0.4
GGPS1-203ENST00000391855 TMEM98Q9Y2Y6 226 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 GPSM3Q9Y4H4 160 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 PLXNB3Q9ULL4 1909 aa12.56□□□□□ -0.4
GGPS1-203ENST00000391855 GOLGA4Q13439 2230 aaKnown RBP12.56□□□□□ -0.4
GGPS1-203ENST00000391855 C2orf81A6NN90 581 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 ERI2A8K979 691 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 STX7O15400 261 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 LIASO43766 372 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 NUDT21O43809 227 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 VEGFDO43915 354 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 NUAK1O60285 661 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 NOBOXO60393 691 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 DNAJC6O75061 913 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 SLC25A14O95258 325 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 FUCA1P04066 466 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 SLC2A4P14672 509 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 HLTFQ14527 1009 aaKnown RBP eCLIP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 TAF1AQ15573 450 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 OASLQ15646 514 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 MARK2Q7KZI7 788 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 NRROSQ86YC3 692 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 CCL4L1Q8NHW4 92 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 ZDHHC1Q8WTX9 485 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 CCDC74AQ96AQ1 378 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 TMEM121Q9BTD3 319 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 SUDS3Q9H7L9 328 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 ARNT2Q9HBZ2 717 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 APPL1Q9UKG1 709 aa12.55□□□□□ -0.4
GGPS1-203ENST00000391855 OAS3Q9Y6K5 1087 aaKnown RBP12.55□□□□□ -0.4
GGPS1-203ENST00000391855 GLYATL1P3A0A0U1RQE8 302 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 TCRBV7S2A1N4TA0A589 114 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 TRABD2BA6NFA1 517 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 AURKAO14965 403 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 GRID2O43424 1007 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 CRTAMO95727 393 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 AGTP01019 485 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms