RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 OR5K4A6NMS3 321 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 APOL1O14791 398 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 MTA2O94776 668 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 CLDN7O95471 211 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 JCHAINP01591 159 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 PRB1P04280 392 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 POLD2P49005 469 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 SPINT3P49223 89 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 LIMK2P53671 638 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 NIPAL4Q0D2K0 466 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 DSG2Q14126 1118 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 MESDQ14696 234 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 QPCTQ16769 361 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 HENMT1Q5T8I9 393 aaKnown RBP12.89□□□□□ -0.35
RPAIN-202ENST00000381208 PDPK2PQ6A1A2 396 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 SLC9A4Q6AI14 798 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 SFTPA2Q8IWL1 248 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 OR10G6Q8NH81 332 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 SLC35G2Q8TBE7 412 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 MED8Q96G25 268 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 HERPUD2Q9BSE4 406 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 PACSIN1Q9BY11 444 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 SEMA6CQ9H3T2 930 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 EPB41L1Q9H4G0 881 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 RDH14Q9HBH5 336 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
RPAIN-202ENST00000381208 KCNK4Q9NYG8 393 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 INTUQ9ULD6 942 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 TMEM98Q9Y2Y6 226 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 PCDHGA3Q9Y5H0 932 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 ZNF462Q96JM2 2506 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 IGHV1OR21-1A0A087WYE8 117 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 IGHV5-10-1A0A0J9YXX1 117 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 PPM1DO15297 605 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 DUX1O43812 170 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 MAP3K6O95382 1288 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ITGB2P05107 769 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ITIH1P19827 911 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 CD1CP29017 333 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 CSTF2P33240 577 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPAIN-202ENST00000381208 CD86P42081 329 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 NR2C2P49116 596 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 MAPK10P53779 464 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 RAB15P59190 212 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 DCDC1P59894 354 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 SLC10A2Q12908 348 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-202ENST00000381208 MANEAQ5SRI9 462 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 CCDC70Q6NSX1 233 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 TMEM71Q6P5X7 295 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 USP53Q70EK8 1073 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 SFRP1Q8N474 314 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPAIN-202ENST00000381208 PLD5Q8N7P1 536 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 USP7Q93009 1102 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 SGF29Q96ES7 293 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 AHCYL2Q96HN2 611 aaKnown RBP12.88□□□□□ -0.35
RPAIN-202ENST00000381208 TAAR9Q96RI9 348 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 SLC38A3Q99624 504 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 NUDT22Q9BRQ3 303 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ZSCAN5AQ9BUG6 496 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ASPSCR1Q9BZE9 553 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 CARD9Q9H257 536 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ZFYVE1Q9HBF4 777 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 SARS2Q9NP81 518 aaKnown RBP12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ABHD10Q9NUJ1 306 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 NFKBIL1Q9UBC1 381 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-202ENST00000381208 ZNHIT2Q9UHR6 403 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 HEY1Q9Y5J3 304 aa12.88□□□□□ -0.35
RPAIN-202ENST00000381208 KIR2DS5A0A0G2JLQ3 304 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 A0A0G2JNG1 304 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 STMND1H3BQB6 276 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 KIR2DS3K7RE56 304 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 KCNK1O00180 336 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 INPP4BO15327 924 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 DNAJC6O75061 913 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 SFTPCP11686 197 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 CLCNKAP51800 687 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 AP1B1Q10567 949 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 KIR2DS5Q14953 304 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 C16orf72Q14CZ0 275 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 TCEAL1Q15170 157 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 PTPRRQ15256 657 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 RFLNAQ6ZTI6 216 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 MARK2Q7KZI7 788 aaKnown RBP12.87□□□□□ -0.35
RPAIN-202ENST00000381208 LYSMD3Q7Z3D4 306 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 SLC9B2Q86UD5 537 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 DTX1Q86Y01 620 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 RHOT1Q8IXI2 618 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
RPAIN-202ENST00000381208 PATE1Q8WXA2 126 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 CCDC74BQ96LY2 380 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms