RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 EEF1DP3Q658K8 133 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 SYCE2Q6PIF2 218 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 TCEAL8Q8IYN2 117 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 CHCHD4Q8N4Q1 142 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 WDTC1Q8N5D0 677 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 MFSD2AQ8NA29 543 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 PJA1Q8NG27 643 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 OR7D4Q8NG98 312 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 SLC44A1Q8WWI5 657 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 HTRA1Q92743 480 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 GAL3ST3Q96A11 431 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 RIPOR3Q96MK2 946 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 KLHL32Q96NJ5 620 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 CDRT15Q96T59 188 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 MUC3BQ9H195 1237 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 RNPEPQ9H4A4 650 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ACSS3Q9H6R3 686 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 MINDY3Q9H8M7 445 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 FANCFQ9NPI8 374 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 TRHDEQ9UKU6 1024 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 SNX7Q9UNH6 387 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 CROCCQ5TZA2 2017 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 C2orf81A6NN90 581 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 DNALI1O14645 258 aaPredicted RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 GABRDO14764 452 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 SUSD5O60279 629 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 FAM155BO75949 473 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 IL18RAPO95256 599 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 PTTG1O95997 202 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 RETP07949 1114 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ACRP10323 421 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 KITP10721 976 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 COX4I1P13073 169 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ITPKAP23677 461 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 CDH5P33151 784 aaPredicted RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 DDOSTP39656 456 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ALDH7A1P49419 539 aaKnown RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 MAPK10P53779 464 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 TNK2Q07912 1038 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 SP140Q13342 867 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 NEDD8Q15843 81 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 SLC9A4Q6AI14 798 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ZNF544Q6NX49 715 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 PKN3Q6P5Z2 889 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 TMEM35BQ8NCS4 154 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ZFPM2Q8WW38 1151 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 TFAP2BQ92481 460 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 SNX19Q92543 992 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 CCDC120Q96HB5 630 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ZFYVE19Q96K21 471 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 TSNARE1Q96NA8 513 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 UHRF1Q96T88 793 aaPredicted RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 NFKBIZQ9BYH8 718 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ZNF518BQ9C0D4 1074 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 DDX28Q9NUL7 540 aaKnown RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 ERAP1Q9NZ08 941 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 EIF3KQ9UBQ5 218 aaKnown RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 MARCOQ9UEW3 520 aaPredicted RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 ACAD8Q9UKU7 415 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 TNFSF13BQ9Y275 285 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 MRPS23Q9Y3D9 190 aaKnown RBP8.82□□□□□ -1
ATG4A-203ENST00000372232 ZNF175Q9Y473 711 aa8.82□□□□□ -1
ATG4A-203ENST00000372232 ASB14A6NK59 587 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 RFPL3O75679 317 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 C22orf31O95567 290 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 GOT2P00505 430 aaKnown RBP8.81□□□□□ -1
ATG4A-203ENST00000372232 F2P00734 622 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 TNNC2P02585 160 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 HMGN1P05114 100 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 TRIM23P36406 574 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 GRIA1P42261 906 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 MAGEA11P43364 429 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 HLCSP50747 726 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 PPP5CP53041 499 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 NME5P56597 212 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 MS4A2Q01362 244 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 ZNF252P-AS1Q0IIN9 211 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 SLC13A2Q13183 592 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 BFSP2Q13515 415 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 AQP6Q13520 282 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 PCBP1Q15365 356 aaKnown RBP eCLIP8.81□□□□□ -1
ATG4A-203ENST00000372232 MAPK11Q15759 364 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 TAF12Q16514 161 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 INO80DQ53TQ3 878 aaPredicted RBP8.81□□□□□ -1
ATG4A-203ENST00000372232 C16orf89Q6UX73 402 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 SCARA5Q6ZMJ2 495 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 USP50Q70EL3 339 aaPredicted RBP8.81□□□□□ -1
ATG4A-203ENST00000372232 PIWIL3Q7Z3Z3 882 aaKnown RBP8.81□□□□□ -1
ATG4A-203ENST00000372232 LYSMD2Q8IV50 215 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 TMEM192Q8IY95 271 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 TP53I13Q8NBR0 393 aaPredicted RBP8.81□□□□□ -1
ATG4A-203ENST00000372232 SHCBP1Q8NEM2 672 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 FRS2Q8WU20 508 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 SERAC1Q96JX3 654 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 RNF170Q96K19 258 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 MRGPRX2Q96LB1 330 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 MCEEQ96PE7 176 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 WACQ9BTA9 647 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 LGR4Q9BXB1 951 aa8.81□□□□□ -1
ATG4A-203ENST00000372232 CDT1Q9H211 546 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms