RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 RAD51Q06609 339 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 FRG1Q14331 258 aaKnown RBP17.01■□□□□ 0.31
VEGFA-205ENST00000372067 METTL21CQ5VZV1 264 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 FRA10AC1Q70Z53 315 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 ISL2Q96A47 359 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 NEURL2Q9BR09 285 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 PCDHGB4Q9UN71 923 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 PCDHGB5Q9Y5G0 923 aa17.01■□□□□ 0.31
VEGFA-205ENST00000372067 ZNF840PA6NDX5 716 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 FKBP6O75344 327 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 SEC24AO95486 1093 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 COL6A1P12109 1028 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 EPHB3P54753 998 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 PATL1Q86TB9 770 aaKnown RBP17■□□□□ 0.31
VEGFA-205ENST00000372067 CNDP1Q96KN2 507 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 ADGRE3Q9BY15 652 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 FNIP2Q9P278 1114 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 POMPQ9Y244 141 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 TET1Q8NFU7 2136 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 PEX11BO96011 259 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 MMP2P08253 660 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 SBK3P0C264 359 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 CD1EP15812 388 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 MC4RP32245 332 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 STT3AP46977 705 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 LEPRP48357 1165 aaKnown RBP17■□□□□ 0.31
VEGFA-205ENST00000372067 SMARCB1Q12824 385 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 PPP1R3AQ16821 1122 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 TXNDC8Q6A555 127 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 SETD3Q86TU7 594 aaPredicted RBP17■□□□□ 0.31
VEGFA-205ENST00000372067 FBXO39Q8N4B4 442 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 ZNF558Q96NG5 402 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 ELAC1Q9H777 363 aaKnown RBP17■□□□□ 0.31
VEGFA-205ENST00000372067 IGSF5Q9NSI5 407 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 GIMAP2Q9UG22 337 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 PKP3Q9Y446 797 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 YIPF1Q9Y548 306 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17■□□□□ 0.31
VEGFA-205ENST00000372067 SGSHP51688 502 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 NRG1Q02297 640 aaPredicted RBP17■□□□□ 0.31
VEGFA-205ENST00000372067 PTK2BQ14289 1009 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 NADK2Q4G0N4 442 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 TECRLQ5HYJ1 363 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 FAM126BQ8IXS8 530 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 FBXW8Q8N3Y1 598 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 TBRG4Q969Z0 631 aaKnown RBP eCLIP17■□□□□ 0.317e-6■■■■■ 27.5
VEGFA-205ENST00000372067 GPR21Q99679 349 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 RTKNQ9BST9 563 aa17■□□□□ 0.31
VEGFA-205ENST00000372067 COPG1Q9Y678 874 aaKnown RBP17■□□□□ 0.31
VEGFA-205ENST00000372067 LDB2O43679 373 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 VPS26AO75436 327 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 GJA1P17302 382 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 POLD2P49005 469 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 RING1Q06587 406 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 EIF4EBP2Q13542 120 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 ACAP2Q15057 778 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 AFMIDQ63HM1 303 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 PTRHD1Q6GMV3 140 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 PAQR3Q6TCH7 311 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 CNTN4Q8IWV2 1026 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 PPWD1Q96BP3 646 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 BCAP29Q9UHQ4 241 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 TMA7Q9Y2S6 64 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 KIAA0100Q14667 2235 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 A0A1B0GVM2 712 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 TCAF2A6NFQ2 919 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 PSMD12O00232 456 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 NR5A2O00482 541 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 ATXN1LP0C7T5 689 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 ENDOUP21128 410 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 RCVRNP35243 200 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 MSLNQ13421 630 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 FAM91A1Q658Y4 838 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 FAAH2Q6GMR7 532 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 ELMSAN1Q6PJG2 1045 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 HERC6Q8IVU3 1022 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 RP9Q8TA86 221 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 SPATA17Q96L03 361 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 YME1L1Q96TA2 773 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 S100A14Q9HCY8 104 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 FAM8A1Q9UBU6 413 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 DRGXA6NNA5 263 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 ZNF195O14628 629 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 STC2O76061 302 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 LPOP22079 712 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 CDKN1CP49918 316 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 BTKQ06187 659 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 IHHQ14623 411 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 MYLK3Q32MK0 819 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 DNAJB7Q7Z6W7 309 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 PEX5LQ8IYB4 626 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 LSMEM2Q8N112 164 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 RNF38Q9H0F5 515 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 SYTL2Q9HCH5 934 aa16.99■□□□□ 0.31
VEGFA-205ENST00000372067 RBMX2Q9Y388 322 aaKnown RBP16.99■□□□□ 0.31
VEGFA-205ENST00000372067 NPHS1O60500 1241 aa16.98■□□□□ 0.31
VEGFA-205ENST00000372067 KLKB1P03952 638 aa16.98■□□□□ 0.31
VEGFA-205ENST00000372067 MZF1P28698 734 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms