RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 POLE3Q9NRF9 147 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 ANKRD26Q9UPS8 1709 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 CES1P23141 567 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 RPL9P32969 192 aaKnown RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 GUCA1AP43080 201 aaPredicted RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 SPATA22Q8NHS9 363 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 CCDC3Q9BQI4 270 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 FNDC11Q9BVV2 318 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 MTIF3Q9H2K0 278 aaKnown RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 PRMT5O14744 637 aaPredicted RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 AIREO43918 545 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 NDUFS2O75306 463 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 SCELO95171 688 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 AKR1A1P14550 325 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 CKMT2P17540 419 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 XRCC1P18887 633 aaPredicted RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 AQP1P29972 269 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 SNRPD1P62314 119 aaKnown RBP17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 DLG1Q12959 904 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 PLD1Q13393 1074 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 BICRALQ6AI39 1079 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 UNC5BQ8IZJ1 945 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 ZFP28Q8NHY6 868 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 CD320Q9NPF0 282 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 PCDHB9Q9Y5E1 797 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 TCRBV7S3A2A0A539 114 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 M0R2N6 131 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 SMIM10L2AP0DMW4 78 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 SMIM10L2BP0DMW5 78 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 TAS2R39P59534 338 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 MERTKQ12866 999 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 CCNIQ14094 377 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 HERC3Q15034 1050 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 C5orf22Q49AR2 442 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 OR4K2Q8NGD2 314 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 C1GALT1C1Q96EU7 318 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 UROC1Q96N76 676 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 SPG21Q9NZD8 308 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 STON1Q9Y6Q2 735 aa17.06■□□□□ 0.32
PTP4A1-201ENST00000370651 CASKO14936 926 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 CTPS1P17812 591 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 MYL9P24844 172 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 CCNCP24863 283 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 DGKZQ13574 1117 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 APOLD1Q96LR9 279 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 PRDM8Q9NQV8 689 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 DTLQ9NZJ0 730 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 PSME2Q9UL46 239 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 KCNE2Q9Y6J6 123 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 ITM2AO43736 263 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 SERPINB7O75635 380 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 UROSP10746 265 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 CXCR2P25025 360 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 RPL26P61254 145 aaKnown RBP17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 BEX3Q00994 111 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 TMEM198Q66K66 360 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 OGFOD2Q6N063 350 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 SVOPLQ8N434 492 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 EMID1Q96A84 441 aaPredicted RBP17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 TBATAQ96M53 351 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 COPS8Q99627 209 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 SPON1Q9HCB6 807 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF536O15090 1300 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 PIP5K1BO14986 540 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF460Q14592 562 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 FAM151BQ6UXP7 276 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 DEF8Q6ZN54 512 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 DENND1CQ8IV53 801 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 PPP1R13LQ8WUF5 828 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 CITED4Q96RK1 184 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 GPR21Q99679 349 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 C1orf21Q9H246 121 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 PSMA1P25786 263 aaKnown RBP17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 GJA8P48165 433 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 FAM180AQ6UWF9 173 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 DCBLD1Q8N8Z6 715 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 TEX47Q8TBZ9 253 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 ASB9Q96DX5 294 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 TSPAN18Q96SJ8 248 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 BCAS3Q9H6U6 928 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF358Q9NW07 568 aa17.05■□□□□ 0.32
PTP4A1-201ENST00000370651 EI24O14681 340 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 DHFRP00374 187 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 FABP3P05413 133 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 ADAM17P78536 824 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 ABATP80404 500 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 SREBF2Q12772 1141 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 VGLL4Q14135 290 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 BHLHB9Q6PI77 547 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 CXXC5Q7LFL8 322 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 MON1AQ86VX9 555 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 CHCHD6Q9BRQ6 235 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 SYNDIG1Q9H7V2 258 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms