RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 SARS2Q9NP81 518 aaKnown RBP16.02■□□□□ 0.16
VMA21-202ENST00000370361 KCNK4Q9NYG8 393 aa16.02■□□□□ 0.16
VMA21-202ENST00000370361 ZFC3H1O60293 1989 aaKnown RBP16.01■□□□□ 0.15
VMA21-202ENST00000370361 IGHV1OR21-1A0A087WYE8 117 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 KIR2DS5A0A0G2JLQ3 304 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 PRAMEF33A0A0G2JMD5 474 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 A0A0G2JNG1 304 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 IGHV5-10-1A0A0J9YXX1 117 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 KIR2DS3K7RE56 304 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 PRAMEF10O60809 474 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 DNAJC6O75061 913 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 CLDN7O95471 211 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 JCHAINP01591 159 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 PRB1P04280 392 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 CSTF2P33240 577 aaKnown RBP eCLIP16.01■□□□□ 0.15
VMA21-202ENST00000370361 CD86P42081 329 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 NR2C2P49116 596 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 ATP1A2P50993 1020 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 CLCNKAP51800 687 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 EPHA4P54764 986 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 SLC10A2Q12908 348 aaPredicted RBP16.01■□□□□ 0.15
VMA21-202ENST00000370361 MESDQ14696 234 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 KIR2DS5Q14953 304 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 QPCTQ16769 361 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 MANEAQ5SRI9 462 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 TMEM71Q6P5X7 295 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 WDR74Q6RFH5 385 aaPredicted RBP16.01■□□□□ 0.15
VMA21-202ENST00000370361 USP53Q70EK8 1073 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 SLC9B2Q86UD5 537 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 NT5DC3Q86UY8 548 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 DTX1Q86Y01 620 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 CNGA4Q8IV77 575 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 VSTM4Q8IW00 320 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 PLD5Q8N7P1 536 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 RAPGEF5Q92565 580 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 USP7Q93009 1102 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 IMP4Q96G21 291 aaKnown RBP16.01■□□□□ 0.15
VMA21-202ENST00000370361 AHCYL2Q96HN2 611 aaKnown RBP16.01■□□□□ 0.15
VMA21-202ENST00000370361 TEFMQ96QE5 360 aaKnown RBP16.01■□□□□ 0.15
VMA21-202ENST00000370361 SLC38A3Q99624 504 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 NUDT22Q9BRQ3 303 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 PACSIN1Q9BY11 444 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 ZFYVE1Q9HBF4 777 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 RDH14Q9HBH5 336 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 ABHD10Q9NUJ1 306 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 ZNHIT2Q9UHR6 403 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 TMEM98Q9Y2Y6 226 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 ATMQ13315 3056 aa16.01■□□□□ 0.15
VMA21-202ENST00000370361 B4E171 279 aa16■□□□□ 0.15
VMA21-202ENST00000370361 KCNK1O00180 336 aa16■□□□□ 0.15
VMA21-202ENST00000370361 PPM1DO15297 605 aa16■□□□□ 0.15
VMA21-202ENST00000370361 MTSS1O43312 755 aa16■□□□□ 0.15
VMA21-202ENST00000370361 MAP3K6O95382 1288 aa16■□□□□ 0.15
VMA21-202ENST00000370361 THRAP10827 490 aa16■□□□□ 0.15
VMA21-202ENST00000370361 ITIH1P19827 911 aa16■□□□□ 0.15
VMA21-202ENST00000370361 TSPAN7P41732 249 aa16■□□□□ 0.15
VMA21-202ENST00000370361 MAPK10P53779 464 aa16■□□□□ 0.15
VMA21-202ENST00000370361 C16orf72Q14CZ0 275 aa16■□□□□ 0.15
VMA21-202ENST00000370361 ZNF569Q5MCW4 686 aa16■□□□□ 0.15
VMA21-202ENST00000370361 CCDC70Q6NSX1 233 aa16■□□□□ 0.15
VMA21-202ENST00000370361 LYSMD3Q7Z3D4 306 aa16■□□□□ 0.15
VMA21-202ENST00000370361 TMPRSS9Q7Z410 1059 aa16■□□□□ 0.15
VMA21-202ENST00000370361 PHYKPLQ8IUZ5 450 aa16■□□□□ 0.15
VMA21-202ENST00000370361 SFTPA2Q8IWL1 248 aa16■□□□□ 0.15
VMA21-202ENST00000370361 RHOT1Q8IXI2 618 aa16■□□□□ 0.15
VMA21-202ENST00000370361 CCDC74BQ96LY2 380 aa16■□□□□ 0.15
VMA21-202ENST00000370361 OLFM3Q96PB7 478 aa16■□□□□ 0.15
VMA21-202ENST00000370361 SLC25A51Q9H1U9 297 aa16■□□□□ 0.15
VMA21-202ENST00000370361 PDP2Q9P2J9 529 aa16■□□□□ 0.15
VMA21-202ENST00000370361 HEY1Q9Y5J3 304 aa16■□□□□ 0.15
VMA21-202ENST00000370361 ST14Q9Y5Y6 855 aa16■□□□□ 0.15
VMA21-202ENST00000370361 GCN1Q92616 2671 aaKnown RBP16■□□□□ 0.15
VMA21-202ENST00000370361 C9orf172C9J069 976 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 INPP4BO15327 924 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 EFSO43281 561 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 MFAP3LO75121 409 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 MMP2P08253 660 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 HHEXQ03014 270 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 AP1B1Q10567 949 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 TFDP2Q14188 446 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 IHHQ14623 411 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 PTPRRQ15256 657 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.99■□□□□ 0.15
VMA21-202ENST00000370361 ZDHHC20Q5W0Z9 365 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 SARM1Q6SZW1 724 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 ZNF574Q6ZN55 896 aaPredicted RBP15.99■□□□□ 0.15
VMA21-202ENST00000370361 RFLNAQ6ZTI6 216 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 MARK2Q7KZI7 788 aaKnown RBP15.99■□□□□ 0.15
VMA21-202ENST00000370361 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.99■□□□□ 0.15
VMA21-202ENST00000370361 SLC37A2Q8TED4 501 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 PTCD2Q8WV60 388 aaKnown RBP15.99■□□□□ 0.15
VMA21-202ENST00000370361 ZPBPQ9BS86 351 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 ZMYND15Q9H091 742 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 NHEJ1Q9H9Q4 299 aaPredicted RBP15.99■□□□□ 0.15
VMA21-202ENST00000370361 UCK1Q9HA47 277 aa15.99■□□□□ 0.15
VMA21-202ENST00000370361 CNOT6Q9ULM6 557 aaKnown RBP15.99■□□□□ 0.15
VMA21-202ENST00000370361 HELZ2Q9BYK8 2649 aaKnown RBP15.99■□□□□ 0.15
VMA21-202ENST00000370361 C3orf70A6NLC5 250 aaPredicted RBP15.98■□□□□ 0.15
VMA21-202ENST00000370361 CAPN5O15484 640 aaPredicted RBP15.98■□□□□ 0.15
VMA21-202ENST00000370361 GRID2O43424 1007 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms