RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 UTP15Q8TED0 518 aaKnown RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ASB15Q8WXK1 588 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 KMT5AQ9NQR1 393 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 INTS10Q9NVR2 710 aaKnown RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 MALT1Q9UDY8 824 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 BCL9O00512 1426 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 C1orf196B1AJZ1 125 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 TOR1AO14656 332 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CST1P01037 141 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 GNAO1P09471 354 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF14P17017 642 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 HK3P52790 923 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 PFKPQ01813 784 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 FGFBP1Q14512 234 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SEC23AQ15436 765 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 HIST2H2ACQ16777 129 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 PAN3Q58A45 887 aaKnown RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 FAM160B1Q5W0V3 765 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CDC42EP5Q6NZY7 148 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 AADATQ8N5Z0 425 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ACTL9Q8TC94 416 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 HDAC10Q969S8 669 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ZYG11BQ9C0D3 744 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ABCG8Q9H221 673 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 E9PAM4 449 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 MDM4O15151 490 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 KPNA6O60684 536 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 RFPL1O75677 317 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SCO1O75880 301 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SGPL1O95470 568 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CD72P21854 359 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CTSKP43235 329 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 PPP4CP60510 307 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SPP2Q13103 211 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 TARDBPQ13148 414 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 HHIPL2Q6UWX4 724 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 C16orf86Q6ZW13 317 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CHSY3Q70JA7 882 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 TXNRD3Q86VQ6 643 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CIR1Q86X95 450 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 SNX29P2Q8IUI4 249 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 CCDC71Q8IV32 467 aaPredicted RBP10.39□□□□□ -0.75
PRDM1-201ENST00000369089 C10orf107Q8IVU9 208 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF614Q8N883 585 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 GDPD1Q8N9F7 314 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 ABCB9Q9NP78 766 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 XPNPEP1Q9NQW7 623 aa10.39□□□□□ -0.75
PRDM1-201ENST00000369089 A0A0B4J203 849 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 TCRBV9S1A1TA0A576 114 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 SDR42E2A6NKP2 422 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 C9IYK1 514 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 LDOC1O95751 146 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 CD2P06729 351 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 RBP1P09455 135 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 ZDHHC11BP0C7U3 371 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 IL18Q14116 193 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 TOR2AQ5JU69 321 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 FIP1L1Q6UN15 594 aaKnown RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 LRRC55Q6ZSA7 311 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 R3HCC1LQ7Z5L2 792 aaKnown RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 C11orf96Q7Z7L8 435 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 OSTM1Q86WC4 334 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 C12orf45Q8N5I9 185 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 AP2M1Q96CW1 435 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 WDR55Q9H6Y2 383 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 NGRNQ9NPE2 291 aaKnown RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 C14orf119Q9NWQ9 140 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 MOCS1Q9NZB8 636 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 KLQ9UEF7 1012 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 DENND3A2RUS2 1198 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 F5H423 210 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 L7N2F9 121 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 MYL12BO14950 172 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 CSF2P04141 144 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 ANXA6P08133 673 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 CYP2A7P20853 494 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 HARS2P49590 506 aaKnown RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 CHAF1BQ13112 559 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 UAP1L1Q3KQV9 507 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 DEF8Q6ZN54 512 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 PROSER1Q86XN7 944 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 MEIOBQ8N635 442 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 ZBTB44Q8NCP5 570 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 OR7G3Q8NG95 312 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 OR6Q1Q8NGQ2 317 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 RHOXF1Q8NHV9 184 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 DENND1AQ8TEH3 1009 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 CANT1Q8WVQ1 401 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 PRR11Q96HE9 360 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 PCDHAC1Q9H158 963 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 SNX15Q9NRS6 342 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 PLEKHA6Q9Y2H5 1048 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 SIGLEC1Q9BZZ2 1709 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 DYNC1LI2O43237 492 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 LIASO43766 372 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms