RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 ATP1A1P05023 1023 aaKnown RBP16.9■□□□□ 0.3
FAM3D-201ENST00000358781 JUPP14923 745 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 ADCY8P40145 1251 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 GDF10P55107 478 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 ILF3Q12906 894 aaKnown RBP eCLIP16.9■□□□□ 0.3
FAM3D-201ENST00000358781 OLIG2Q13516 323 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 OASLQ15646 514 aaKnown RBP16.9■□□□□ 0.3
FAM3D-201ENST00000358781 PARP6Q2NL67 630 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 PYCR3Q53H96 274 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 OGFOD3Q6PK18 319 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 GLT6D1Q7Z4J2 308 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 ANP32BQ92688 251 aaKnown RBP16.9■□□□□ 0.3
FAM3D-201ENST00000358781 NAT6Q93015 286 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 RTP4Q96DX8 246 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 PLEKHG4BQ96PX9 1271 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 OR2M4Q96R27 311 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 APOL2Q9BQE5 337 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 GSDMCQ9BYG8 508 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 BPIFA1Q9NP55 256 aa16.9■□□□□ 0.3
FAM3D-201ENST00000358781 ZFC3H1O60293 1989 aaKnown RBP16.89■□□□□ 0.29
FAM3D-201ENST00000358781 METTL18O95568 372 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 PROS1P07225 676 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 CTBSQ01459 385 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 PERM1Q5SV97 790 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 MARK2Q7KZI7 788 aaKnown RBP16.89■□□□□ 0.29
FAM3D-201ENST00000358781 GALNT13Q8IUC8 556 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 CACTIN-AS1Q8N1I8 211 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 GPR156Q8NFN8 814 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 MAPK15Q8TD08 544 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 C1orf54Q8WWF1 131 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 GLYATL1Q969I3 302 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 TBL1YQ9BQ87 522 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 KCNF1Q9H3M0 494 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 SPATS2LQ9NUQ6 558 aaKnown RBP16.89■□□□□ 0.29
FAM3D-201ENST00000358781 IL17CQ9P0M4 197 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 TAAR2Q9P1P5 351 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 GPSM3Q9Y4H4 160 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 ST14Q9Y5Y6 855 aa16.89■□□□□ 0.29
FAM3D-201ENST00000358781 USP24Q9UPU5 2620 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 B4DGG1 531 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 NOBOXO60393 691 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 DNAJC6O75061 913 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
FAM3D-201ENST00000358781 STIP1P31948 543 aaKnown RBP16.88■□□□□ 0.29
FAM3D-201ENST00000358781 TARDBPQ13148 414 aaKnown RBP eCLIP16.88■□□□□ 0.29
FAM3D-201ENST00000358781 CAMK2BQ13554 666 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 SIX1Q15475 284 aaPredicted RBP16.88■□□□□ 0.29
FAM3D-201ENST00000358781 P3H1Q32P28 736 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 CDCP2Q5VXM1 449 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 ZDHHC20Q5W0Z9 365 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 KCTD11Q693B1 232 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 DENND5AQ6IQ26 1287 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 DCBLD1Q8N8Z6 715 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 LRRC45Q96CN5 670 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 PDLIM2Q96JY6 352 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 ABCG4Q9H172 646 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 DPEP2Q9H4A9 486 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 RMI1Q9H9A7 625 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 IL26Q9NPH9 171 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 ZNHIT2Q9UHR6 403 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 CLCA2Q9UQC9 943 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 PKP3Q9Y446 797 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 PLEKHM1Q9Y4G2 1056 aa16.88■□□□□ 0.29
FAM3D-201ENST00000358781 TMEM8BA6NDV4 472 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 BUD23O43709 281 aaKnown RBP16.87■□□□□ 0.29
FAM3D-201ENST00000358781 USP12O75317 370 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 PPFIA2O75334 1257 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 SLC25A14O95258 325 aaPredicted RBP16.87■□□□□ 0.29
FAM3D-201ENST00000358781 MT-CO3P00414 261 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 SPAM1P38567 509 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 SNX1Q13596 522 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 LRP8Q14114 963 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 SPARCL1Q14515 664 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 TAF1AQ15573 450 aaPredicted RBP16.87■□□□□ 0.29
FAM3D-201ENST00000358781 SLC30A9Q6PML9 568 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 PHYKPLQ8IUZ5 450 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 SFTPA2Q8IWL1 248 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 REXO1L1PQ8IX06 675 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 OR6C4Q8NGE1 309 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 DTX3LQ8TDB6 740 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 CCDC74AQ96AQ1 378 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 VPS35Q96QK1 796 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 ARNT2Q9HBZ2 717 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 TRIM39Q9HCM9 518 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 ARFGAP3Q9NP61 516 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.87■□□□□ 0.29
FAM3D-201ENST00000358781 ATXN10Q9UBB4 475 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 FEZ2Q9UHY8 353 aaPredicted RBP16.87■□□□□ 0.29
FAM3D-201ENST00000358781 ZNF148Q9UQR1 794 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 PCYT1BQ9Y5K3 369 aaPredicted RBP16.87■□□□□ 0.29
FAM3D-201ENST00000358781 ARL5AQ9Y689 179 aa16.87■□□□□ 0.29
FAM3D-201ENST00000358781 C2orf81A6NN90 581 aa16.86■□□□□ 0.29
FAM3D-201ENST00000358781 STX7O15400 261 aaKnown RBP16.86■□□□□ 0.29
FAM3D-201ENST00000358781 ZZEF1O43149 2961 aa16.86■□□□□ 0.29
FAM3D-201ENST00000358781 ZSCAN12O43309 604 aa16.86■□□□□ 0.29
FAM3D-201ENST00000358781 CEP104O60308 925 aa16.86■□□□□ 0.29
FAM3D-201ENST00000358781 FGGP02679 453 aa16.86■□□□□ 0.29
FAM3D-201ENST00000358781 LPOP22079 712 aaPredicted RBP16.86■□□□□ 0.29
FAM3D-201ENST00000358781 ACTR1BP42025 376 aa16.86■□□□□ 0.29
FAM3D-201ENST00000358781 ACTR1AP61163 376 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms