RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 GET4Q7L5D6 327 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 BBS7Q8IWZ6 715 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 SH3RF2Q8TEC5 729 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 TMIGD2Q96BF3 282 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 VPS39Q96JC1 886 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 SLC39A8Q9C0K1 460 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 SFXN1Q9H9B4 322 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 VPS45Q9NRW7 570 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 BFARQ9NZS9 450 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 MYRFQ9Y2G1 1151 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 SH3PXD2BA1X283 911 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 ERI2A8K979 691 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 SOX1O00570 391 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NPHS1O60500 1241 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 JUNP05412 331 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 SLC7A1P30825 629 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 OR1E1P30953 314 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 CCR10P46092 362 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 PSME3P61289 254 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 KCTD21Q4G0X4 260 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 ADGRF1Q5T601 910 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 C8orf82Q6P1X6 216 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 LPCAT2Q7L5N7 544 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 LZTR1Q8N653 840 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 RNF148Q8N7C7 305 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 AGR3Q8TD06 166 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NPAS2Q99743 824 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 TASP1Q9H6P5 420 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 PLGRKTQ9HBL7 147 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NSMCE4AQ9NXX6 385 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 CD300AQ9UGN4 299 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 SLC8A2Q9UPR5 921 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 hCG_2014768A0A024R1R8 64 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 TK2O00142 265 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 SDHDO14521 159 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 GREM1O60565 184 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 PTPN3P26045 913 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 POLD2P49005 469 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NPY2RP49146 381 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NDST2P52849 883 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NAGLUP54802 743 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NUP107P57740 925 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 SLC7A9P82251 487 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 LRP8Q14114 963 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 NHSL2Q5HYW2 709 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 PID1Q7Z2X4 250 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 KCNMB4Q86W47 210 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 RTL3Q8N8U3 475 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 CEP70Q8NHQ1 597 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 ZSCAN18Q8TBC5 510 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 USP33Q8TEY7 942 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 LRTOMTQ8WZ04 291 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 ATXN7L3BQ96GX2 97 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 TDP1Q9NUW8 608 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 DUS2Q9NX74 493 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 CLDND1Q9NY35 253 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 KLHL8Q9P2G9 620 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 PTBP2Q9UKA9 531 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 CDH7Q9ULB5 785 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 RAD54BQ9Y620 910 aa12.64□□□□□ -0.39
RTFDC1-202ENST00000357348 TRPC5OSA6NMA1 111 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 FGF10O15520 208 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 COQ9O75208 318 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 HOXC13P31276 330 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 VIPR2P41587 438 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 RAB15P59190 212 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 OLIG2Q13516 323 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 GRM3Q14832 879 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 CYTH1Q15438 398 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 HMBOX1Q6NT76 420 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 PPP4R4Q6NUP7 873 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 SYCE2Q6PIF2 218 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 RTL10Q7L3V2 364 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 ZC3HC1Q86WB0 502 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 KLHDC8BQ8IXV7 354 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 HMGCLL1Q8TB92 370 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 MOCOSQ96EN8 888 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 MFSD3Q96ES6 412 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 RMND5BQ96G75 393 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 GPR78Q96P69 363 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 SLC29A1Q99808 456 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 RHOJQ9H4E5 214 aa12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 CLK4Q9HAZ1 481 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-202ENST00000357348 A0A0D9SEW6 157 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 E7ENX8 843 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 HTRA2O43464 458 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 DLX3O60479 287 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 RHOQP17081 205 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 STX5Q13190 355 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 NRF1Q16656 503 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TSTD2Q5T7W7 516 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms