RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 DUSP10Q9Y6W6 482 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 LOC100506127A0A0U1RQW1 187 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 WRBO00258 174 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 AKAP8O43823 692 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PPP3R1P63098 170 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ATP1A4Q13733 1029 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SF1Q15637 639 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 RFX4Q33E94 735 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 DACT2Q5SW24 774 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 P4HA3Q7Z4N8 544 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SRMSQ9H3Y6 488 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MCUBQ9NWR8 336 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NINJ2Q9NZG7 142 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 CNTNAP1P78357 1384 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SYN3O14994 580 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PLIN3O60664 434 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SAGP10523 405 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 DLG1Q12959 904 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ITGA7Q13683 1181 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MAPK11Q15759 364 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 FAM110CQ1W6H9 321 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 EIPR1Q53HC9 387 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 FIP1L1Q6UN15 594 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ANKFN1Q8N957 763 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SGCDQ92629 289 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SORCS3Q9UPU3 1222 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MMP3P08254 477 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PTPN2P17706 415 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ASMTP46597 345 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MAPK14Q16539 360 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 GCNT6Q5T4J0 391 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 LRP10Q7Z4F1 713 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 C2orf15Q8WU43 125 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 CERS2Q96G23 380 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 QKIQ96PU8 341 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ACO2Q99798 780 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 DNAJB4Q9UDY4 337 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NCANO14594 1321 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CCDC162PA2VCL2 907 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CAPN14A8MX76 684 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SNX4O95219 450 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 C22orf31O95567 290 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PENKP01210 267 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CYP1A2P05177 515 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 UROSP10746 265 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CBX3Q13185 183 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SDHAF4Q5VUM1 108 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 RBM12BQ8IXT5 1001 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 LIX1Q8N485 282 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TRNT1Q96Q11 434 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 GORASP1Q9BQQ3 440 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CRISPLD1Q9H336 500 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 RNF121Q9H920 327 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 NUDT4Q9NZJ9 180 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PCDHB1Q9Y5F3 818 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SIGLEC1Q9BZZ2 1709 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ABHD2P08910 425 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF37AP17032 561 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TAL1P17542 331 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ADRA1DP25100 572 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 FLT3LGP49771 235 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 KHKP50053 298 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 FAAP100Q0VG06 881 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DUSP28Q4G0W2 176 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF730Q6ZMV8 503 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PIGKQ92643 395 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CDRT15Q96T59 188 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 GPN1Q9HCN4 374 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 EQTNQ9NQ60 294 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 UBAP1Q9NZ09 502 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CALML5Q9NZT1 146 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PCYOX1Q9UHG3 505 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 C3orf18Q9UK00 162 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 GMEB2Q9UKD1 530 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TOPAZ1Q8N9V7 1692 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 A0A1W2PQH9 124 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 USP12O75317 370 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CCNFP41002 786 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PNLIPRP1P54315 467 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CASP6P55212 293 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 RPL26P61254 145 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 MINDY4Q4G0A6 757 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 C9orf64Q5T6V5 341 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ERICH5Q6P6B1 374 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 POMZP3Q6PJE2 187 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SLC24A5Q71RS6 500 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SETD6Q8TBK2 473 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SLC35C1Q96A29 364 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PTGES3LE9PB15 166 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CA12O43570 354 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 RPP40O75818 363 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 NR2C1P13056 603 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TFEBP19484 476 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ITPKAP23677 461 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ITGA3P26006 1051 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 MNDAP41218 407 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 KCNJ5P48544 419 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 STARP49675 285 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms