RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PGM5Q15124 567 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 SBK1Q52WX2 424 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 EIF1ADQ8N9N8 165 aaKnown RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 HTRA1Q92743 480 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 ASB2Q96Q27 587 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 KELP23276 732 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 SLC6A3Q01959 620 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ITGB3BPQ13352 177 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 CKAP2Q8WWK9 683 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 STRA6Q9BX79 667 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 SEMA4AQ9H3S1 761 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 LDOC1O95751 146 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 LTA4HP09960 611 aaKnown RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 NR2F6P10588 404 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 HSD11B1P28845 292 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 OR4C6Q8NH72 309 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 NKX2-3Q8TAU0 364 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ENY2Q9NPA8 101 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF490Q9ULM2 529 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 SUV39H1O43463 412 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 OR1F1O43749 312 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 FADS2O95864 444 aaKnown RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ATAT1Q5SQI0 421 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 TC2NQ8N9U0 490 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 SHC3Q92529 594 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ZFRQ96KR1 1074 aaKnown RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF726A6NNF4 738 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 CD52P31358 61 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 MXD1Q05195 221 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 TNK2Q07912 1038 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF720Q7Z2F6 126 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 GALNT13Q8IUC8 556 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 GPR65Q8IYL9 337 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 C12orf29Q8N999 325 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF75CPQ92670 426 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 KLHL5Q96PQ7 755 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 KXD1Q9BQD3 176 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 RBMX2Q9Y388 322 aaKnown RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 PROSCO94903 275 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 CBX6O95503 412 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 DGKEP52429 567 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 PPP3CAQ08209 521 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 LRRC69Q6ZNQ3 347 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 SLC25A36Q96CQ1 311 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 COMMD4Q9H0A8 199 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 MAPRE3Q9UPY8 281 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ARHGEF12Q9NZN5 1544 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 A0A087WXM4 84 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 CTSKP43235 329 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 RGS8P57771 180 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-201ENST00000356083 RELL1Q8IUW5 271 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 ZDHHC15Q96MV8 337 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 PHF12Q96QT6 1004 aa17.19■□□□□ 0.34
COL27A1-201ENST00000356083 CRB1P82279 1406 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ARHGAP31Q2M1Z3 1444 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 FAM205AQ6ZU69 1335 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 LINGO3P0C6S8 592 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.342e-9■■■■□ 26.5
COL27A1-201ENST00000356083 LPOP22079 712 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-201ENST00000356083 SLC9A4Q6AI14 798 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ZDHHC17Q8IUH5 632 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 TEFMQ96QE5 360 aaKnown RBP17.18■□□□□ 0.34
COL27A1-201ENST00000356083 USB1Q9BQ65 265 aaKnown RBP17.18■□□□□ 0.34
COL27A1-201ENST00000356083 LOC100509620A0A075B734 347 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 DHPSP49366 369 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-201ENST00000356083 PRKAA2P54646 552 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 RGS21Q2M5E4 152 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 TMEM168Q9H0V1 697 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 HIPK3Q9H422 1215 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ATG2BQ96BY7 2078 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 HSD17B2P37059 387 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF234Q14588 700 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 KCNQ5Q9NR82 932 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 MYH1P12882 1939 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 MYH4Q9Y623 1939 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 EIF1AYO14602 144 aaKnown RBP17.18■□□□□ 0.34
COL27A1-201ENST00000356083 AFTPHQ6ULP2 937 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 TMPRSS11AQ6ZMR5 421 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 POLLQ9UGP5 575 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 FAM240BA0A1B0GVZ2 78 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 FPGTO14772 594 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 TGFB3P10600 412 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 CREMQ03060 361 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 LRRC73Q5JTD7 316 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 PPP2R2DQ66LE6 453 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 POF1BQ8WVV4 589 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ALG2Q9H553 416 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF639Q9UID6 485 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 NPEPPSL1A6NEC2 478 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ICAM3P32942 547 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 MLIPQ5VWP3 458 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 CHST15Q7LFX5 561 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-201ENST00000356083 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 HERVK_113Q902F9 699 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 SLC24A2Q9UI40 661 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms