RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 HSD17B1P14061 328 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TCF3P15923 654 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 IFNA8P32881 189 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 STAT5BP51692 787 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CTF1Q16619 201 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SMU1Q2TAY7 513 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FAM98BQ52LJ0 330 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 PYCR3Q53H96 274 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 RBM20Q5T481 1227 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ANKRD34AQ69YU3 496 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CCBE1Q6UXH8 406 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 HACD2Q6Y1H2 254 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 GALNT5Q7Z7M9 940 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SULF1Q8IWU6 871 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 RPL3LQ92901 407 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ITCHQ96J02 903 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TXNDC15Q96J42 360 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CELF6Q96J87 481 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TMEM246Q9BRR3 403 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 RNF19AQ9NV58 838 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 NUP205Q92621 2012 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TRIM64BA6NI03 449 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CCDC154A6NI56 674 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 PIP5K1BO14986 540 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 B4GALT4O60513 344 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CPB1P15086 417 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SPNP16150 400 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 GPX3P22352 226 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 KRT6CP48668 564 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 GP2P55259 537 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ARPP19P56211 112 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 DEFA1P59665 94 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 DEFA3P59666 94 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TPI1P60174 286 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 DAB2P98082 770 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 GRM1Q13255 1194 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 KCNAB2Q13303 367 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 NAPEPLDQ6IQ20 393 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ZCCHC8Q6NZY4 707 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 USP51Q70EK9 711 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 OTOP3Q7RTS5 596 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 MFSD4AQ8N468 514 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ZNF280CQ8ND82 737 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CHDHQ8NE62 594 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FAM83FQ8NEG4 500 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 NCLNQ969V3 563 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FKBP10Q96AY3 582 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 HSFY1Q96LI6 401 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 PPM1MQ96MI6 270 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ZNF560Q96MR9 790 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CENPOQ9BU64 300 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 EMILIN2Q9BXX0 1053 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ALOXE3Q9BYJ1 711 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CYP3A43Q9HB55 503 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TRMT13Q9NUP7 481 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FAM118AQ9NWS6 357 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 ERVK-18Q9QC07 812 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SYNPO2Q9UMS6 1093 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FAM172BPA6NC97 362 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CENPBD1B2RD01 187 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 AXIN1O15169 862 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 PMPCBO75439 489 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 UPK1BO75841 260 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CST1P01037 141 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 PFKMP08237 780 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 LBPP18428 481 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CXCR2P25025 360 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 GLUD2P49448 558 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 DIO3P55073 304 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 EMX1Q04741 257 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TMEM132DQ14C87 1099 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FAM214AQ32MH5 1076 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 STEAP3Q658P3 488 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TTC23LQ6PF05 361 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FKBP9P1Q75LS8 142 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 DCP2Q8IU60 420 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 MINDY1Q8N5J2 469 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 BEST2Q8NFU1 509 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SPATA22Q8NHS9 363 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 TRAPPC12Q8WVT3 735 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 MUL1Q969V5 352 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 VMP1Q96GC9 406 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 KCNA7Q96RP8 456 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 RPAP3Q9H6T3 665 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CASS4Q9NQ75 786 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 THG1LQ9NWX6 298 aaKnown RBP7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SNTG2Q9NY99 539 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SLAMF8Q9P0V8 285 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 LIMD1Q9UGP4 676 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 SLC2A6Q9UGQ3 507 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 LTBP1Q14766 1721 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 LOC100506127A0A0U1RQW1 187 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SLC1A7O00341 560 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PPP6CO00743 305 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 HOXC11O43248 304 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 RGS20O76081 388 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PGLSO95336 258 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SIX3O95343 332 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 CRYZL1O95825 349 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ANGPTL1O95841 491 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms