RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ZNF540Q8NDQ6 660 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 ZFP28Q8NHY6 868 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 TWIST2Q8WVJ9 160 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 TSEN34Q9BSV6 310 aaKnown RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 NFKBIZQ9BYH8 718 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 HMX1Q9NP08 348 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-202ENST00000343090 RAD18Q9NS91 495 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 BTBD3Q9Y2F9 522 aa8.04□□□□□ -1.12
UBE4B-202ENST00000343090 H3BMM5 538 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 MSCO60682 206 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 C22orf31O95567 290 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 AMHP03971 560 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PRKAR2AP13861 404 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 CHRNA4P43681 627 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 CD97P48960 835 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 GPX6P59796 221 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ATP6V0D1P61421 351 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PRKCQQ04759 706 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 OFCC1Q8IZS5 231 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 FSTL5Q8N475 847 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PNPT1Q8TCS8 783 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 HEXDCQ8WVB3 486 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PROX1Q92786 737 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 HMCESQ96FZ2 354 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 GPR21Q99679 349 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 HDHD2Q9H0R4 259 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ATP13A3Q9H7F0 1226 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 MOV10Q9HCE1 1003 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TP73O15350 636 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SNAP91O60641 907 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 CATP04040 527 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 POLR2LP62875 67 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PHC1P78364 1004 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF829Q3KNS6 432 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SLC9B1Q4ZJI4 515 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 UBAP2Q5T6F2 1119 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TTC23Q5W5X9 447 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 REP15Q6BDI9 236 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 CHADLQ6NUI6 762 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 CRTC3Q6UUV7 619 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 KCTD8Q6ZWB6 473 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ADAMTSL2Q86TH1 951 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 KRT78Q8N1N4 520 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TCAIMQ8N3R3 496 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 C19orf18Q8NEA5 215 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TSSK3Q96PN8 268 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PANX1Q96RD7 426 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 MAF1Q9H063 256 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 FZD8Q9H461 694 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 EPB41L1Q9H4G0 881 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 FANCEQ9HB96 536 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PADI3Q9ULW8 664 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TCAF1Q9Y4C2 921 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SPACA6W5XKT8 324 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TTC24A2A3L6 582 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 IQCF5A8MTL0 148 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 FOXD2O60548 495 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 RPP40O75818 363 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SEMA3DO95025 777 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 CNPP09543 421 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 DBTP11182 482 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ITPKAP23677 461 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SNRPD1P62314 119 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PHKG1Q16816 387 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SPANXN2Q5MJ10 180 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TMEM198Q66K66 360 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 GALNT5Q7Z7M9 940 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 LUZP2Q86TE4 346 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PDPRQ8NCN5 879 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SEC14L1Q92503 715 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 C12orf43Q96C57 262 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 NSMCE3Q96MG7 304 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 HNRNPABQ99729 332 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 EHD1Q9H4M9 534 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 KLHL1Q9NR64 748 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 NRXN3Q9Y4C0 1643 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 NEMP2A6NFY4 417 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TOP3BO95985 862 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ELNP15502 786 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 AQP1P29972 269 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ILF2Q12905 390 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 ZFP69Q49AA0 526 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 INO80DQ53TQ3 878 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 TMEM214Q6NUQ4 689 aaKnown RBP8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SCAMP5Q8TAC9 235 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 REPS1Q96D71 796 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 SLC47A1Q96FL8 570 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 RPS6KB2Q9UBS0 482 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 MFHAS1Q9Y4C4 1052 aa8.03□□□□□ -1.12
UBE4B-202ENST00000343090 PIPSLA2A3N6 862 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 ARL5CA6NH57 179 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 CCRL2O00421 344 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 MYL12BO14950 172 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 TNFRSF21O75509 655 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 NCK1P16333 377 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 NOS3P29474 1203 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 ZBED5Q49AG3 693 aa8.02□□□□□ -1.12
UBE4B-202ENST00000343090 INTS6LQ5JSJ4 861 aaKnown RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms