RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ZC3H18Q86VM9 953 aaKnown RBP20■□□□□ 0.79
SYNE2-201ENST00000341472 KCNE4Q8WWG9 221 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 EID2BQ96D98 161 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 HEMGNQ9BXL5 484 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 DPH1Q9BZG8 443 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 RMI1Q9H9A7 625 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 UBP1Q9NZI7 540 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 VPS18Q9P253 973 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 FAM153AQ9UHL3 310 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 OAS3Q9Y6K5 1087 aaKnown RBP20■□□□□ 0.79
SYNE2-201ENST00000341472 LRRK1Q38SD2 2015 aa20■□□□□ 0.79
SYNE2-201ENST00000341472 SOWAHDA6NJG2 315 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 FADS2P1A8MWK0 482 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 GPR3P46089 330 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 MARCKSL1P49006 195 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 BROXQ5VW32 411 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 PID1Q7Z2X4 250 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 ZNF438Q7Z4V0 828 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 PIM3Q86V86 326 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 NAGSQ8N159 534 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 PATE1Q8WXA2 126 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 KRT35Q92764 455 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 CCDC97Q96F63 343 aaPredicted RBP19.99■□□□□ 0.79
SYNE2-201ENST00000341472 VAT1Q99536 393 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 SPATA16Q9BXB7 569 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 KLHL8Q9P2G9 620 aaPredicted RBP19.99■□□□□ 0.79
SYNE2-201ENST00000341472 ZNF711Q9Y462 761 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 PRKAB1Q9Y478 270 aa19.99■□□□□ 0.79
SYNE2-201ENST00000341472 TRBV23OR9-2A0A075B6M9 112 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 RCCD1A6NED2 376 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 CDRT15L2A8MXV6 281 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 HACD1B0YJ81 288 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 KLK10O43240 276 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 DNAJC6O75061 913 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 CPNE6O95741 557 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 EPOP01588 193 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 ITGA2BP08514 1039 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 FECHP22830 423 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 CD68P34810 354 aaPredicted RBP19.98■□□□□ 0.79
SYNE2-201ENST00000341472 UGT1A5P35504 534 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 WNT3AP56704 352 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 PPP2R5EQ16537 467 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 CLPPQ16740 277 aaPredicted RBP19.98■□□□□ 0.79
SYNE2-201ENST00000341472 SOWAHCQ53LP3 525 aaPredicted RBP19.98■□□□□ 0.79
SYNE2-201ENST00000341472 CCDC181Q5TID7 509 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 ALS2CLQ60I27 953 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 CHST15Q7LFX5 561 aaPredicted RBP19.98■□□□□ 0.79
SYNE2-201ENST00000341472 GPR26Q8NDV2 337 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 TMEM159Q96B96 161 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 HAUS1Q96CS2 278 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 PCDHA3Q9Y5H8 950 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 DUSP10Q9Y6W6 482 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 MYLKQ15746 1914 aa19.98■□□□□ 0.79
SYNE2-201ENST00000341472 NBEAQ8NFP9 2946 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 ATRXP46100 2492 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 GOLGA6L3A6NEY3 463 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 PPM1DO15297 605 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 SLC25A14O95258 325 aaPredicted RBP19.97■□□□□ 0.79
SYNE2-201ENST00000341472 SLC4A1P02730 911 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 HOXB3P14651 431 aaPredicted RBP19.97■□□□□ 0.79
SYNE2-201ENST00000341472 NFKB1P19838 968 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 CD1CP29017 333 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 TNNT3P45378 269 aaPredicted RBP19.97■□□□□ 0.79
SYNE2-201ENST00000341472 COPS2P61201 443 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 GSE1Q14687 1217 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 NR1D2Q14995 579 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 PHF19Q5T6S3 580 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 BBS12Q6ZW61 710 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 GPR155Q7Z3F1 870 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 CLEC14AQ86T13 490 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 HTR3CQ8WXA8 447 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 FCRL5Q96RD9 977 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 ZSCAN5AQ9BUG6 496 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 CARD9Q9H257 536 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 TRIM39Q9HCM9 518 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 AKAP7Q9P0M2 348 aaPredicted RBP19.97■□□□□ 0.79
SYNE2-201ENST00000341472 TRHDEQ9UKU6 1024 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 LOXL2Q9Y4K0 774 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 ADAMTS20P59510 1910 aa19.97■□□□□ 0.79
SYNE2-201ENST00000341472 SHROOM3Q8TF72 1996 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 LOC285095A0A1B0GVY8 99 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 H7C0C1 242 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 GRID2O43424 1007 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 NUAK1O60285 661 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 JMJD7P0C870 316 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 HGFP14210 728 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 ATP5OP48047 213 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 UCNP55089 124 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 DCDC1P59894 354 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 XRCC4Q13426 336 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 MAP9Q49MG5 647 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 ZNF569Q5MCW4 686 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 KDELC1Q6UW63 502 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 RAD9BQ6WBX8 426 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 JAMLQ86YT9 394 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 SLITRK4Q8IW52 837 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 ZNF567Q8N184 647 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 TRAM1L1Q8N609 369 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 FCRL3Q96P31 734 aaPredicted RBP19.96■□□□□ 0.79
SYNE2-201ENST00000341472 QKIQ96PU8 341 aaKnown RBP eCLIP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms