RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 STC1P52823 247 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 CDH6P55285 790 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 PTSQ03393 145 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 UBXN1Q04323 297 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 DPYSL2Q16555 572 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 C4orf17Q53FE4 359 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 MARC1Q5VT66 337 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 IYDQ6PHW0 289 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 CHST15Q7LFX5 561 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-202ENST00000338325 SLC9B2Q86UD5 537 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 ANKRD20A12PQ8NF67 263 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 EXD1Q8NHP7 514 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 SMIM14Q96QK8 99 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 ERGIC2Q96RQ1 377 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 SYT11Q9BT88 431 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 RIOK2Q9BVS4 552 aaKnown RBP11.39□□□□□ -0.59
CSMD2-202ENST00000338325 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-202ENST00000338325 TRIM7Q9C029 511 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 LRRC4CQ9HCJ2 640 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 FANCLQ9NW38 375 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 PRKAB1Q9Y478 270 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
CSMD2-202ENST00000338325 PCYT1BQ9Y5K3 369 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-202ENST00000338325 KIR2DS5A0A0G2JLQ3 304 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 A0A0G2JNG1 304 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 A6NCN8 305 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 LILRA5A6NI73 299 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 MKRN2OSH3BPM6 223 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 KIR2DS3K7RE56 304 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 FZD6O60353 706 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 ATP1A1P05023 1023 aaKnown RBP11.38□□□□□ -0.59
CSMD2-202ENST00000338325 F3P13726 295 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 F8A1P23610 371 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 SERPINB6P35237 376 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 DLSTP36957 453 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 KIR2DS5Q14953 304 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 TCTN3Q6NUS6 607 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 LYSMD3Q7Z3D4 306 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 POLNQ7Z5Q5 900 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 PLXDC1Q8IUK5 500 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 CCDC13Q8IYE1 715 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 TEX19Q8NA77 164 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 AVL9Q8NBF6 648 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 CSPG4P5Q96PW8 444 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 TBC1D10AQ9BXI6 508 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 ULBP3Q9BZM4 244 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 NT5MQ9NPB1 228 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
CSMD2-202ENST00000338325 KCNK6Q9Y257 313 aa11.38□□□□□ -0.59
CSMD2-202ENST00000338325 OAS3Q9Y6K5 1087 aaKnown RBP11.38□□□□□ -0.59
CSMD2-202ENST00000338325 OR5K4A6NMS3 321 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 K7EM74 188 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 SNX2O60749 519 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 ACP5P13686 325 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 ZNF28P17035 718 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 IL1R2P27930 398 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 PCK1P35558 622 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 EPHB1P54762 984 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 MLLT10P55197 1068 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 FOXM1Q08050 763 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 SMTNL2Q2TAL5 461 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 C6orf15Q6UXA7 325 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-202ENST00000338325 IRF2BP2Q7Z5L9 587 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 RAVER1Q8IY67 606 aaKnown RBP11.37□□□□□ -0.59
CSMD2-202ENST00000338325 TEX26Q8N6G2 289 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 HSPH1Q92598 858 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 POLR1EQ9GZS1 481 aaKnown RBP11.37□□□□□ -0.59
CSMD2-202ENST00000338325 RMI1Q9H9A7 625 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 CPNE7Q9UBL6 633 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 CROTQ9UKG9 612 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 POLHQ9Y253 713 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 SCINQ9Y6U3 715 aa11.37□□□□□ -0.59
CSMD2-202ENST00000338325 TNRC6AQ8NDV7 1962 aaKnown RBP11.37□□□□□ -0.59
CSMD2-202ENST00000338325 SPTAN1Q13813 2472 aaKnown RBP11.37□□□□□ -0.59
CSMD2-202ENST00000338325 RFPL1O75677 317 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 C9P02748 559 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 KRT7P08729 469 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 GFERP55789 205 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 ITKQ08881 620 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 ERV3-1Q14264 604 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 ASB18Q6ZVZ8 466 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 PHYKPLQ8IUZ5 450 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 RNF31Q96EP0 1072 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 STAMBPL1Q96FJ0 436 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 C9orf72Q96LT7 481 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 PRDM8Q9NQV8 689 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.36□□□□□ -0.59
CSMD2-202ENST00000338325 CNOT6Q9ULM6 557 aaKnown RBP11.36□□□□□ -0.59
CSMD2-202ENST00000338325 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
CSMD2-202ENST00000338325 FADS2P1A8MWK0 482 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 CLDN7O95471 211 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 FURINP09958 794 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TCF4P15884 667 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 PMS2P54278 862 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 UBE2IP63279 158 aaKnown RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 BOLA3Q53S33 107 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 HENMT1Q5T8I9 393 aaKnown RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 ALG1LQ6GMV1 187 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms