RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 HCN3Q9P1Z3 774 aa14.25□□□□□ -0.13
TRIM25-201ENST00000316881 ASMTP46597 345 aa14.25□□□□□ -0.13
TRIM25-201ENST00000316881 GABRB2P47870 512 aa14.25□□□□□ -0.13
TRIM25-201ENST00000316881 LRRN4Q8WUT4 740 aa14.25□□□□□ -0.13
TRIM25-201ENST00000316881 C1orf50Q9BV19 199 aa14.25□□□□□ -0.13
TRIM25-201ENST00000316881 ST6GALNAC4Q9H4F1 302 aa14.25□□□□□ -0.13
TRIM25-201ENST00000316881 ERVK-5Q9HDB9 667 aa14.25□□□□□ -0.13
TRIM25-201ENST00000316881 CCDC177Q9NQR7 707 aaPredicted RBP14.25□□□□□ -0.13
TRIM25-201ENST00000316881 NPEPPSL1A6NEC2 478 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 INSIG1O15503 277 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 TNFAIP8O95379 198 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 TRBC1P01850 177 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 NT5EP21589 574 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 ZNF132P52740 706 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 PSME3P61289 254 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 FNIP1Q8TF40 1166 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 C3orf18Q9UK00 162 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 RGSL1A5PLK6 1076 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 DDX3YO15523 660 aaKnown RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 FSHRP23945 695 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 S100GP29377 79 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 DGKEP52429 567 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 TRAF3Q13114 568 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 RNASEH2BQ5TBB1 312 aaKnown RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 TMEM164Q5U3C3 297 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 MSANTD2Q6P1R3 559 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 DEF8Q6ZN54 512 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 MARK4Q96L34 752 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 SLC25A51Q9H1U9 297 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 CLEC4MQ9H2X3 399 aaPredicted RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 DLG5Q8TDM6 1919 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 STK16O75716 305 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 PSMG1O95456 288 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 PRAMEF1O95521 474 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 CFIP05156 583 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 HOXB6P17509 224 aaKnown RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 HOXC12P31275 282 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 SPANXN2Q5MJ10 180 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 IRGCQ6NXR0 463 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 OTOP3Q7RTS5 596 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 SPATA6LQ8N4H0 392 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 HDDC3Q8N4P3 179 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 KCTD15Q96SI1 283 aaPredicted RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 RNPEPL1Q9HAU8 725 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 DIABLOQ9NR28 239 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 ZNF624Q9P2J8 865 aaPredicted RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 RBM7Q9Y580 266 aaKnown RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 FAM237BA0A1B0GVD1 139 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 SUV39H1O43463 412 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 CCL5P13501 91 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 TPSB2P20231 275 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 SPIBQ01892 262 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 LPIN1Q14693 890 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 TPSAB1Q15661 275 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 QPCTQ16769 361 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 DGUOKQ16854 277 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 ATXN7L2Q5T6C5 722 aaPredicted RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 HECTD2Q5U5R9 776 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 EEF1AKMT1Q8WVE0 214 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 GINS4Q9BRT9 223 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 CDADC1Q9BWV3 514 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 PCBD2Q9H0N5 130 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 ABCG8Q9H221 673 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 PCDHGC3Q9UN70 934 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 KLRG2A4D1S0 409 aaPredicted RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 GIMD1P0DJR0 217 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 FOXM1Q08050 763 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 ZNF155Q12901 538 aaPredicted RBP14.24□□□□□ -0.13
TRIM25-201ENST00000316881 NAE1Q13564 534 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 NEDD8Q15843 81 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 PDK4Q16654 411 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 RTL4Q6ZR62 310 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 PRR23BQ6ZRT6 265 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 OR7D4Q8NG98 312 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 IKZF3Q9UKT9 509 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 Q9Y3F1 56 aa14.24□□□□□ -0.13
TRIM25-201ENST00000316881 GRIA3P42263 894 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 USP46P62068 366 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 KLHL24Q6TFL4 600 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 ECHDC2Q86YB7 292 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 BRSK1Q8TDC3 778 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 TMEM27Q9HBJ8 222 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 POLR3HQ9Y535 204 aaPredicted RBP14.23□□□□□ -0.13
TRIM25-201ENST00000316881 COX4I1P13073 169 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 PDGFRLQ15198 375 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 BTN2A1Q7KYR7 527 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 KRT74Q7RTS7 529 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 C2orf73Q8N5S3 287 aaPredicted RBP14.23□□□□□ -0.13
TRIM25-201ENST00000316881 NETO2Q8NC67 525 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 FAM98AQ8NCA5 519 aaKnown RBP14.23□□□□□ -0.13
TRIM25-201ENST00000316881 BRI3BPQ8WY22 251 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 MIEF2Q96C03 454 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 PNPLA8Q9NP80 782 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 RBPJLQ9UBG7 517 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 GMPPBQ9Y5P6 360 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 NID2Q14112 1375 aa14.23□□□□□ -0.13
TRIM25-201ENST00000316881 HNRNPLP14866 589 aaKnown RBP eCLIP14.23□□□□□ -0.139e-14■■■■■ 43.1
TRIM25-201ENST00000316881 MAT2AP31153 395 aaKnown RBP14.23□□□□□ -0.13
TRIM25-201ENST00000316881 GNPDA1P46926 289 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms