RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 HGSO14964 777 aaPredicted RBP12.59□□□□□ -0.39
CKS2-201ENST00000314355 B4GAT1O43505 415 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 PSTPIP1O43586 416 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 CST8O60676 142 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 PRLP01236 227 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 FUCA1P04066 466 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 ATP1A1P05023 1023 aaKnown RBP12.59□□□□□ -0.39
CKS2-201ENST00000314355 GPR89BP0CG08 455 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 PDX1P52945 283 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 SKOR1P84550 965 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 GALNT3Q14435 633 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 TCEAL1Q15170 157 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 ZNF569Q5MCW4 686 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 PDPK2PQ6A1A2 396 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 C17orf82Q86X59 251 aaPredicted RBP12.59□□□□□ -0.39
CKS2-201ENST00000314355 PHYKPLQ8IUZ5 450 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 LRRC45Q96CN5 670 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 WBP1Q96G27 269 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 COX14Q96I36 57 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 RBM41Q96IZ5 413 aaKnown RBP12.59□□□□□ -0.39
CKS2-201ENST00000314355 AGAP2Q99490 1192 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 VAT1Q99536 393 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 B3GNT4Q9C0J1 378 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 CARD9Q9H257 536 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 RDH14Q9HBH5 336 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.59□□□□□ -0.39
CKS2-201ENST00000314355 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
CKS2-201ENST00000314355 UNC13CQ8NB66 2214 aa12.58□□□□□ -0.39
CKS2-201ENST00000314355 GRID2O43424 1007 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 DUX1O43812 170 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 SNX2O60749 519 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
CKS2-201ENST00000314355 LIPCP11150 499 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 HGFP14210 728 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 VCLP18206 1134 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 CTNNA2P26232 953 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 ATP1A2P50993 1020 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 HHEXQ03014 270 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 ZBTB17Q13105 803 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 GTF2H3Q13889 308 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 NR1D2Q14995 579 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 SLC14A2Q15849 920 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 MANEAQ5SRI9 462 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 ZDHHC20Q5W0Z9 365 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 TMEM71Q6P5X7 295 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 RFLNAQ6ZTI6 216 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 PID1Q7Z2X4 250 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 LYSMD3Q7Z3D4 306 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 TRIM74Q86UV6 250 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 AGBL5Q8NDL9 886 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 OR4D9Q8NGE8 314 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 GDAP1Q8TB36 358 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 USP7Q93009 1102 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 IMP4Q96G21 291 aaKnown RBP12.58□□□□□ -0.4
CKS2-201ENST00000314355 TAAR9Q96RI9 348 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 ARHGAP9Q9BRR9 750 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 HERPUD2Q9BSE4 406 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 CEP41Q9BYV8 373 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 GLOD4Q9HC38 313 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 TRIM39Q9HCM9 518 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
CKS2-201ENST00000314355 FAM153AQ9UHL3 310 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 ALG6Q9Y672 507 aa12.58□□□□□ -0.4
CKS2-201ENST00000314355 KIR2DS5A0A0G2JLQ3 304 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 A0A0G2JNG1 304 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 A0A1W2PNU3 283 aaPredicted RBP12.57□□□□□ -0.4
CKS2-201ENST00000314355 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
CKS2-201ENST00000314355 K7ENP7 123 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 KIR2DS3K7RE56 304 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 PPM1DO15297 605 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 NUAK1O60285 661 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 NDST3O95803 873 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 SOD1P00441 154 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 SLC4A1P02730 911 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 MMP2P08253 660 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 ACP5P13686 325 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 CD1CP29017 333 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 FASLGP48023 281 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 LIMK2P53671 638 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 CFHR1Q03591 330 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 CLN3Q13286 438 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 SQSTM1Q13501 440 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 KIR2DS5Q14953 304 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 INSCQ1MX18 579 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 HENMT1Q5T8I9 393 aaKnown RBP12.57□□□□□ -0.4
CKS2-201ENST00000314355 ALS2CLQ60I27 953 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 INO80CQ6PI98 192 aaPredicted RBP12.57□□□□□ -0.4
CKS2-201ENST00000314355 SARM1Q6SZW1 724 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 MFSD7Q6UXD7 560 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 NPNTQ6UXI9 565 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 ZNF438Q7Z4V0 828 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 TMC3Q7Z5M5 1100 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 DAAM2Q86T65 1068 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 SLITRK4Q8IW52 837 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 TXLNBQ8N3L3 684 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 TRAM1L1Q8N609 369 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 CNTD1Q8N815 330 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 BRSK1Q8TDC3 778 aa12.57□□□□□ -0.4
CKS2-201ENST00000314355 TEKT5Q96M29 485 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms