RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 PRDM6Q9NQX0 595 aa11.33□□□□□ -0.6
CTDSPL-202ENST00000310189 SIRPGQ9P1W8 387 aa11.33□□□□□ -0.6
CTDSPL-202ENST00000310189 TRIM13O60858 407 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SMIM24O75264 130 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SERPINE1P05121 402 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 F7P08709 466 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ELFN1P0C7U0 828 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CHRM1P11229 460 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 HNRNPLP14866 589 aaKnown RBP eCLIP11.32□□□□□ -0.66e-6■■□□□ 12.3
CTDSPL-202ENST00000310189 IL9P15248 144 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 TIMP2P16035 220 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CD9P21926 228 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 FDXRP22570 491 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ATP6V0D1P61421 351 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 XIAPP98170 497 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SEMA3AQ14563 771 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ITIH4Q14624 930 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 STARD3Q14849 445 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZNF789Q5FWF6 425 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 C9orf64Q5T6V5 341 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 DPPA4Q7L190 304 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 RAB44Q7Z6P3 723 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PIGWQ7Z7B1 504 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 TSPAN33Q86UF1 283 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZSWIM9Q86XI8 627 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CEP97Q8IW35 865 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZNF366Q8N895 744 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 RAB7BQ96AH8 199 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 NXNL1Q96CM4 212 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 DCUN1D1Q96GG9 259 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SPATA16Q9BXB7 569 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 FAM83DQ9H4H8 585 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 IL26Q9NPH9 171 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 THAP1Q9NVV9 213 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 KCTD5Q9NXV2 234 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 THEGQ9P2T0 379 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ARL2BPQ9Y2Y0 163 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 DOCK8Q8NF50 2099 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 KIAA1549LQ6ZVL6 1849 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CCDC189A1A4V9 331 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ANHXE9PGG2 379 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 H0Y858 1186 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 HAX1O00165 279 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PSMD11O00231 422 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SNX3O60493 162 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SNUPNO95149 360 aaKnown RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 HLA-EP13747 358 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ACRV1P26436 265 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 NSG1P42857 185 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 GLRBP48167 497 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SPINT3P49223 89 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 RGS4P49798 205 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 GALK1P51570 392 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 IL2P60568 153 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PFKPQ01813 784 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PTSQ03393 145 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SFSWAPQ12872 951 aaKnown RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZNF460Q14592 562 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ACOX1Q15067 660 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PTPRRQ15256 657 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CHRNA6Q15825 494 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CDKN3Q16667 212 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 AAK1Q2M2I8 961 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 TTLL9Q3SXZ7 439 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CFAP157Q5JU67 520 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZYG11AQ6WRX3 759 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 RALGPS2Q86X27 583 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 SLC22A9Q8IVM8 553 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 NRSN1Q8IZ57 195 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PLD6Q8N2A8 252 aaKnown RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 NXPE1Q8N323 547 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PHTF2Q8N3S3 785 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 FSTL5Q8N475 847 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZNF513Q8N8E2 541 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ACVR1CQ8NER5 493 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 KCNJ9Q92806 393 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 C7orf26Q96N11 449 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 PANX3Q96QZ0 392 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 COPS8Q99627 209 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 OLFM1Q99784 485 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZSCAN5AQ9BUG6 496 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 MECRQ9BV79 373 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 FBRSQ9HAH7 460 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 TRPV5Q9NQA5 729 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 CPSF2Q9P2I0 782 aaKnown RBP11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 EMCNQ9ULC0 261 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 STON1Q9Y6Q2 735 aa11.32□□□□□ -0.6
CTDSPL-202ENST00000310189 XIRP2A4UGR9 3374 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 TMEM114B3SHH9 223 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 QSOX1O00391 747 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 TGDSO95455 350 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 ADH1BP00325 375 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 CTSLP07711 333 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 OR56A5P0C7T3 313 aa11.31□□□□□ -0.6
CTDSPL-202ENST00000310189 RPS3P23396 243 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms