RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ARMC4Q5T2S8 1044 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 DENND1CQ8IV53 801 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 RTL3Q8N8U3 475 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 TXNDC5Q8NBS9 432 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 ZHX1-C8orf76Q96EF9 292 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 ZFYVE19Q96K21 471 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 ZNF778Q96MU6 729 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 TMCC3Q9ULS5 477 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 GIT1Q9Y2X7 761 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 CCNYL2Q5T2Q4 361 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 PIM3Q86V86 326 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 OSTM1Q86WC4 334 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 BBS7Q8IWZ6 715 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 PCSK9Q8NBP7 692 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 ERLEC1Q96DZ1 483 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 VRTNQ9H8Y1 702 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 SAMHD1Q9Y3Z3 626 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 TRIM24O15164 1050 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 TLR5O60602 858 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 FTH1P02794 183 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 ANXA5P08758 320 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 COX7A2P14406 83 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 CYP3A5P20815 502 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 MTPNP58546 118 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 ACSM2AQ08AH3 577 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 NIPAL4Q0D2K0 466 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 ACSM2BQ68CK6 577 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 POC5Q8NA72 575 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 LEMD2Q8NC56 503 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 GANCQ8TET4 914 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 TSSK3Q96PN8 268 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 C8orf4Q9NR00 106 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 ADPRHL2Q9NX46 363 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 TEKT2Q9UIF3 430 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 AGO1Q9UL18 857 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 PDZK1P1A8MUH7 402 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 ATP6V1G1O75348 118 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 CNPP09543 421 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 CES1P23141 567 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 RRM2P31350 389 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 BCL2L1Q07817 233 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 CTC1Q2NKJ3 1217 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 SPRYD7Q5W111 196 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 ZCCHC8Q6NZY4 707 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 C11orf96Q7Z7L8 435 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 TMEM174Q8WUU8 243 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 IRGQQ8WZA9 623 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 REXO5Q96IC2 774 aaKnown RBP13.22□□□□□ -0.29
DDX54-201ENST00000306014 TSPAN18Q96SJ8 248 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 C20orf27Q9GZN8 174 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 GMIPQ9P107 970 aa13.22□□□□□ -0.29
DDX54-201ENST00000306014 AQP12BA6NM10 295 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 KPNA6O60684 536 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 RHOQP17081 205 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 HERVK_113P63132 956 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 HPCAP84074 193 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 PRKCQQ04759 706 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 BNIP3Q12983 259 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 HIST2H2ACQ16777 129 aaPredicted RBP13.21□□□□□ -0.29
DDX54-201ENST00000306014 CCDC142Q17RM4 750 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 MYLK3Q32MK0 819 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 HIST2H2AA3Q6FI13 130 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 AQP12AQ8IXF9 295 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 LRRC58Q96CX6 371 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 ERVK-6Q9BXR3 956 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 EIF2B4Q9UI10 523 aaKnown RBP13.21□□□□□ -0.29
DDX54-201ENST00000306014 DYTNA2CJ06 578 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.21□□□□□ -0.29
DDX54-201ENST00000306014 ARPC2O15144 300 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 UMPSP11172 480 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 MAGP20916 626 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 INO80DQ53TQ3 878 aaPredicted RBP13.21□□□□□ -0.29
DDX54-201ENST00000306014 TMC5Q6UXY8 1006 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 TTC30BQ8N4P2 665 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 ARRDC4Q8NCT1 418 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 RTP4Q96DX8 246 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 NFKBIZQ9BYH8 718 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 RASSF1Q9NS23 344 aa13.21□□□□□ -0.29
DDX54-201ENST00000306014 STBD1O95210 358 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 NDST3O95803 873 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 CYP4F2P78329 520 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 CYP4F3Q08477 520 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 GALNT2Q10471 571 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 LSAMPQ13449 338 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 TUSC3Q13454 348 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 ARMCX4Q5H9R4 360 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 FAM151BQ6UXP7 276 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 CYS1Q717R9 158 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 ZNF605Q86T29 641 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 GPR180Q86V85 440 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 MCOLN3Q8TDD5 553 aa13.21□□□□□ -0.3
DDX54-201ENST00000306014 BTN2A3PQ96KV6 586 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms