RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 QSOX1O00391 747 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 SCN1BQ07699 218 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 FAM92BQ6ZTR7 304 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 AGO3Q9H9G7 860 aaKnown RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 IGSF9Q9P2J2 1179 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 RWDD3Q9Y3V2 267 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 GPC6Q9Y625 555 aaPredicted RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 PRMT5O14744 637 aaPredicted RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 CASKO14936 926 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 MT-ND1P03886 318 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 CHRNGP07510 517 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 OR4A15Q8NGL6 344 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 PCDH19Q8TAB3 1148 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 HEXDCQ8WVB3 486 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 ZNF607Q96SK3 696 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 MFHAS1Q9Y4C4 1052 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 FAM240BA0A1B0GVZ2 78 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 PKMP14618 531 aaKnown RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 NR4A1P22736 598 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 SDC2P34741 201 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 THOP1P52888 689 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 DLG1Q12959 904 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 EIF2B5Q13144 721 aaKnown RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 PLD1Q13393 1074 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 AHSA2Q719I0 299 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 NIFKQ9BYG3 293 aaKnown RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 AGO1Q9UL18 857 aaKnown RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 SNX7Q9UNH6 387 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 MRC1P22897 1456 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 UGT1A9O60656 530 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 GJB1P08034 283 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 SLURP2P0DP57 97 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 NMBRP28336 390 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 GUCA1AP43080 201 aaPredicted RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 SLC18A2Q05940 514 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 SETMARQ53H47 684 aaPredicted RBP12.79□□□□□ -0.36
COL3A1-201ENST00000304636 IL23RQ5VWK5 629 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 CCDC185Q8N715 623 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 ATP13A3Q9H7F0 1226 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 SP140LQ9H930 580 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 UGT1A7Q9HAW7 530 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 UGT1A10Q9HAW8 530 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 UGT1A8Q9HAW9 530 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 OXSMQ9NWU1 459 aa12.79□□□□□ -0.36
COL3A1-201ENST00000304636 ASLP04424 464 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 RAP2AP10114 183 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 NR2F1P10589 423 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 C1orf127Q8N9H9 656 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 MOSPD2Q8NHP6 518 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 GRPEL2Q8TAA5 225 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 FAIM2Q9BWQ8 316 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 PCDHB1Q9Y5F3 818 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 UBXN8O00124 270 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 FANCGO15287 622 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 ITM2AO43736 263 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 S100A9P06702 114 aaKnown RBP12.78□□□□□ -0.36
COL3A1-201ENST00000304636 KIR3DL1P43629 444 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 RBM48Q5RL73 367 aaKnown RBP12.78□□□□□ -0.36
COL3A1-201ENST00000304636 RELL1Q8IUW5 271 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 ZZZ3Q8IYH5 903 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 KLHL5Q96PQ7 755 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 NUSAP1Q9BXS6 441 aaKnown RBP12.78□□□□□ -0.36
COL3A1-201ENST00000304636 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 NUDT4Q9NZJ9 180 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 COMMD9Q9P000 198 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 WDR37Q9Y2I8 494 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 H3BSA7 217 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 MPZL2O60487 215 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 NCK1P16333 377 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 PCSK2P16519 638 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 SNRPD1P62314 119 aaKnown RBP12.78□□□□□ -0.36
COL3A1-201ENST00000304636 CPTPQ5TA50 214 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 TCAIMQ8N3R3 496 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 GPR156Q8NFN8 814 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 WDR48Q8TAF3 677 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 FCGR1BQ92637 280 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 PDHXO00330 501 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 PIP5K1BO14986 540 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 METTL18O95568 372 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 TPTEP56180 551 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 GPX6P59796 221 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 ABATP80404 500 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 TMEM214Q6NUQ4 689 aaKnown RBP12.78□□□□□ -0.36
COL3A1-201ENST00000304636 FAM20CQ8IXL6 584 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 C1GALT1C1Q96EU7 318 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 PSME2Q9UL46 239 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 C3P01024 1663 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 SLC22A1O15245 554 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 TCF4P15884 667 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 GLUD2P49448 558 aa12.78□□□□□ -0.36
COL3A1-201ENST00000304636 PRKAG1P54619 331 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms