RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TAS2R42Q7RTR8 314 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SYTL1Q8IYJ3 562 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 COLGALT2Q8IYK4 626 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 Q8N9G6 341 aaPredicted RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 S100ZQ8WXG8 99 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 NPY6RQ99463 290 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 IGSF5Q9NSI5 407 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 INTS7Q9NVH2 962 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 UBQLN1Q9UMX0 589 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 NME7Q9Y5B8 376 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 PCDHB3Q9Y5E6 796 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 ZBTB42B2RXF5 422 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 AGRPO00253 132 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 TSPAN1O60635 241 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 FTH1P02794 183 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 CAPNS1P04632 268 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 PIRTP0C851 137 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 HSD17B1P14061 328 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 AGXTP21549 392 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 CLCN5P51795 746 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 UFM1P61960 85 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 TMC5Q6UXY8 1006 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 PLPPR4Q7Z2D5 763 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 GALNT5Q7Z7M9 940 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 AKAP14Q86UN6 197 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 CLIP4Q8N3C7 705 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 OSMRQ99650 979 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 DUSP16Q9BY84 665 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
TRUB1-201ENST00000298746 ITM2CQ9NQX7 267 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 COMMD8Q9NX08 183 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 SCHIP1Q9P0W5 487 aaPredicted RBP11.36□□□□□ -0.59
TRUB1-201ENST00000298746 LEF1Q9UJU2 399 aaPredicted RBP11.36□□□□□ -0.59
TRUB1-201ENST00000298746 COL2A1P02458 1487 aaPredicted RBP11.36□□□□□ -0.59
TRUB1-201ENST00000298746 TBX1O43435 398 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 SLC22A3O75751 556 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 ZBTB7AO95365 584 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 PSMD8P48556 350 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 WNT3AP56704 352 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 OR4D2P58180 307 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 SIM2Q14190 667 aaPredicted RBP11.36□□□□□ -0.59
TRUB1-201ENST00000298746 WSCD1Q658N2 575 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 BNIPLQ7Z465 357 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 SPARTQ8N0X7 666 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 FBXO39Q8N4B4 442 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 MINDY1Q8N5J2 469 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 LEMD2Q8NC56 503 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 NSMCE3Q96MG7 304 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 ACOX2Q99424 681 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 GSTO2Q9H4Y5 243 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 ENTPD7Q9NQZ7 604 aa11.36□□□□□ -0.59
TRUB1-201ENST00000298746 ACOX3O15254 700 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 TSPAN3O60637 253 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 CDK14O94921 469 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 VAC14Q08AM6 782 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 PAGE3Q5JUK9 113 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 ZNF678Q5SXM1 525 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 KCTD11Q693B1 232 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 HACD2Q6Y1H2 254 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 FEM1AQ9BSK4 669 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 SPATC1LQ9H0A9 340 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 QTRT2Q9H974 415 aaKnown RBP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 CACNG4Q9UBN1 327 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 SARDHQ9UL12 918 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 PCDHGA8Q9Y5G5 932 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 IGKV6-21A0A0C4DH24 114 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 LINC00854A0A1B0GVQ3 168 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 A6NL46 340 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 SOAT2O75908 522 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 C22orf31O95567 290 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 UGT2B4P06133 528 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 GSNP06396 782 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 ALOX12P18054 663 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 DNAJB2P25686 324 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 KCNC1P48547 511 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 ALDH3A2P51648 485 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 NRG1Q02297 640 aaPredicted RBP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 SF3B4Q15427 424 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 UNC50Q53HI1 259 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 C6orf141Q5SZD1 244 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 SPRED1Q7Z699 444 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 TFAP2DQ7Z6R9 452 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 OR10Q1Q8NGQ4 319 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 ADAMTS16Q8TE57 1224 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 RIBC2Q9H4K1 309 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 C8orf4Q9NR00 106 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 ASB14A6NK59 587 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 RHOBTB1O94844 696 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 FADS2O95864 444 aaKnown RBP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 CYBBP04839 570 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 UMPSP11172 480 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 HTR1BP28222 390 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 NR4A2P43354 598 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 POLR2JP52435 117 aaKnown RBP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 TUBA3CQ13748 450 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 ANKS6Q68DC2 871 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms