RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 SULT1E1P49888 294 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 HK2P52789 917 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 SH3BP2P78314 561 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 NDUFA5Q16718 116 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 HIST2H2ACQ16777 129 aaPredicted RBP13.43□□□□□ -0.26
SKA3-201ENST00000298260 AAK1Q2M2I8 961 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 DEFB106AQ8N104 65 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 BEND7Q8N7W2 519 aaPredicted RBP13.43□□□□□ -0.26
SKA3-201ENST00000298260 PNPT1Q8TCS8 783 aaKnown RBP13.43□□□□□ -0.26
SKA3-201ENST00000298260 SLC35F5Q8WV83 523 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 NODALQ96S42 347 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 FEM1AQ9BSK4 669 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 RHOBTB2Q9BYZ6 727 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 GSTO2Q9H4Y5 243 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
SKA3-201ENST00000298260 DDX28Q9NUL7 540 aaKnown RBP13.43□□□□□ -0.26
SKA3-201ENST00000298260 ZNF70Q9UC06 446 aaPredicted RBP13.43□□□□□ -0.26
SKA3-201ENST00000298260 PCDHA9Q9Y5H5 950 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 CNTNAP1P78357 1384 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 ASPDHA6ND91 283 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 WNT10BO00744 389 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 RAD51BO15315 384 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 CCNKO75909 580 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 CNTN5O94779 1100 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 PCMT1P22061 227 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 CHRNA4P43681 627 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 TRPC1P48995 793 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 GLUD2P49448 558 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 RPS6KA2Q15349 733 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 TTC30BQ8N4P2 665 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 ROPN1LQ96C74 230 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 TUBGCP3Q96CW5 907 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 GAD1Q99259 594 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 HPS4Q9NQG7 708 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 FAM118AQ9NWS6 357 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 SNX5Q9Y5X3 404 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 OAS3Q9Y6K5 1087 aaKnown RBP13.43□□□□□ -0.26
SKA3-201ENST00000298260 DNAH12Q6ZR08 3092 aa13.43□□□□□ -0.26
SKA3-201ENST00000298260 I6L893 689 aaPredicted RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 CYP4B1P13584 511 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 HGFP14210 728 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 PRKCAP17252 672 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 CYP2B6P20813 491 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 GMPSP49915 693 aaPredicted RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 CLCN3P51790 818 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 EPS8Q12929 822 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 KCNAB2Q13303 367 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 SELPLGQ14242 412 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 PIM3Q86V86 326 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 SYTL1Q8IYJ3 562 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 SLC38A6Q8IZM9 456 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 NLGN4XQ8N0W4 816 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 DCBLD1Q8N8Z6 715 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 TTC16Q8NEE8 873 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 FAR1Q8WVX9 515 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 EMID1Q96A84 441 aaPredicted RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 MBOAT4Q96T53 435 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 MRPL57Q9BQC6 102 aaKnown RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 DSN1Q9H410 356 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 MAGEE1Q9HCI5 957 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 TRIM39Q9HCM9 518 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 SETD4Q9NVD3 440 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 N6AMT1Q9Y5N5 214 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 SCN1AP35498 2009 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 HACD1B0YJ81 288 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 ENDOUP21128 410 aaKnown RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 FMO4P31512 558 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 SLC12A2P55011 1212 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 IL1RL1Q01638 556 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 ILF2Q12905 390 aaKnown RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 DAG1Q14118 895 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 SYPL2Q5VXT5 272 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 KCTD11Q693B1 232 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 IPMKQ8NFU5 416 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 OR52K2Q8NGK3 314 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 NSUN6Q8TEA1 469 aaKnown RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 TXNDC15Q96J42 360 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 C6orf62Q9GZU0 229 aaPredicted RBP13.42□□□□□ -0.26
SKA3-201ENST00000298260 GMIPQ9P107 970 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 FZD10Q9ULW2 581 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 BRCA2P51587 3418 aa13.42□□□□□ -0.26
SKA3-201ENST00000298260 ZNF99A8MXY4 864 aaPredicted RBP13.41□□□□□ -0.26
SKA3-201ENST00000298260 VWA5AO00534 786 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 GPIP06744 558 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 ERCC2P18074 760 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 EIF2DP41214 584 aaKnown RBP13.41□□□□□ -0.26
SKA3-201ENST00000298260 MTHFRP42898 656 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 ALDH3A2P51648 485 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 MTPNP58546 118 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 GHRHRQ02643 423 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 GRM1Q13255 1194 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 SMN1Q16637 294 aaKnown RBP13.41□□□□□ -0.26
SKA3-201ENST00000298260 TECRLQ5HYJ1 363 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 GALNT5Q7Z7M9 940 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
SKA3-201ENST00000298260 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms