RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ATP13A1Q9HD20 1204 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 TUBA8Q9NY65 449 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 INSL5Q9Y5Q6 135 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 ZBBXA8MT70 800 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 SERPINH1P50454 418 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 SCNN1BP51168 640 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 YBEYP58557 167 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 GALNT3Q14435 633 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF470Q6ECI4 717 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 DDX53Q86TM3 631 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 SPATA6LQ8N4H0 392 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 TMIGD2Q96BF3 282 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 NXNL1Q96CM4 212 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 KLF16Q9BXK1 252 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 CD300AQ9UGN4 299 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 MYO7AQ13402 2215 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 HTRA2O43464 458 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 MBL2P11226 248 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 LAG3P18627 525 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 NUP107P57740 925 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 TMED1Q13445 227 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 FASTKQ14296 549 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 VEPH1Q14D04 833 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 C5orf22Q49AR2 442 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 SAMD4BQ5PRF9 694 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 LDB1Q86U70 411 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 MYO1HQ8N1T3 1032 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 ARL14EPQ8N8R7 260 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 ANKFN1Q8N957 763 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 FNDC8Q8TC99 324 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 OVCA2Q8WZ82 227 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 SMIM14Q96QK8 99 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 VPS45Q9NRW7 570 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 MRPL17Q9NRX2 175 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 GTSE1Q9NYZ3 720 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 A0A087X1B8 175 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 OR51F1A6NGY5 319 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 PSMD12O00232 456 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 FBP2O00757 339 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 ZSCAN9O15535 394 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 ATXN1LP0C7T5 689 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 ATP5F1P24539 256 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 RFC2P35250 354 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 FAM45BPQ6NSW5 357 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 PPP4R4Q6NUP7 873 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 HACD2Q6Y1H2 254 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 TRIM67Q6ZTA4 783 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 HMGCLL1Q8TB92 370 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 FAM45AQ8TCE6 357 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 SLC29A1Q99808 456 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 MEAF6Q9HAF1 191 aa18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 CNOT6Q9ULM6 557 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-201ENST00000284767 PTPRSQ13332 1948 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 FAM95CA0A1B0GW59 222 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 PRORSD1PA6NEY8 169 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF701M0R085 212 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 ARSDP51689 593 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CDH4P55283 916 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 SMAD3P84022 425 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 KCTD21Q4G0X4 260 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CEP97Q8IW35 865 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 BBS5Q8N3I7 341 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 FIBCD1Q8N539 461 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 TXNDC5Q8NBS9 432 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 OR13J1Q8NGT2 312 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 POLR1EQ9GZS1 481 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 POMKQ9H5K3 350 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 ARNT2Q9HBZ2 717 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNHIT2Q9UHR6 403 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 DOCK6Q96HP0 2047 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CHD5Q8TDI0 1954 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CBX4O00257 560 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 UBDO15205 165 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 STAMBPO95630 424 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CNPP09543 421 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 BMP2P12643 396 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 GJA1P17302 382 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CYP4F8P98187 520 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 NHSL2Q5HYW2 709 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 ADGRF1Q5T601 910 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 HMBOX1Q6NT76 420 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 KLHL35Q6PF15 583 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CNSTQ6PJW8 725 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 LINGO4Q6UY18 593 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 ZBTB49Q6ZSB9 765 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 PTAR1Q7Z6K3 402 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CMTR2Q8IYT2 770 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 FATE1Q969F0 183 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 PLD4Q96BZ4 506 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 CIB1Q99828 191 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 SLC25A23Q9BV35 468 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 PLGRKTQ9HBL7 147 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 EML4Q9HC35 981 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 TBCCD1Q9NVR7 557 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 TMEM181Q9P2C4 612 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF510Q9Y2H8 683 aa18.23■□□□□ 0.51
PDLIM3-201ENST00000284767 TRIM64CA6NLI5 447 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 FGF18O76093 207 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 SNRPB2P08579 225 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms